Tableau information
Concept source: d1goka_ amino acid (a.a.) range (SER5)(ALA38)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER5) (GLY14) H1
(GLY14) (VAL20) E2
(ASP23) (THR29) H3
(ASN32) (ALA38) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 159.1° E2
H3 -117.2° 82.6° H3
H4 -20.3° 176.5° -97.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1tuxa_ : (SER5) (ALA38) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d3o2la_ : (SER5) (ALA38) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermoascus aurantiacus [TaxId: 5087]
d1goka_ : (SER5) (ALA38) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d1i1xa_ : (VAL6) (ALA38) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d1k6aa_ : (SER5) (ALA38) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d4l4oa_ : (SER12) (PHE44) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Caldicellulosiruptor bescii [TaxId: 521460]
d1tlta2 : (ALA128) (GLY179) [view usage] : d.81.1.5 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |Glucose 6-phosphate dehydrogenase-like |Virulence factor MviM |Escherichia coli [TaxId: 562]
d3fzia_ : (VAL136) (ASN187) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d2fcua_ : (THR8) (GLY93) [view usage] : b.82.2.9 |Double-stranded beta-helix |Clavaminate synthase-like |PhyH-like |Syringomycin biosynthesis enzyme 2, SyrB2 |Pseudomonas syringae pv. syringae [TaxId: 321]
d1hzma_ : (GLN42) (CYS90) [view usage] : c.46.1.1 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Cell cycle control phosphatase, catalytic domain |Erk2 binding domain of Mapk phosphatase mkp-3 |Human (Homo sapiens) [TaxId: 9606]
d1cnza_ : (LYS59) (LYS103) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |3-isopropylmalate dehydrogenase, IPMDH |Salmonella typhimurium [TaxId: 90371]
d1jq3a_ : (GLU185) (PHE226) [view usage] : c.66.1.17 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Spermidine synthase |Spermidine synthase |Thermotoga maritima [TaxId: 2336]
d2hnkc_ : (TYR160) (ASP211) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Leptospira interrogans [TaxId: 173]
d3i1ja_ : (LEU136) (LEU184) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas syringae [TaxId: 323]
d3flka_ : (TRP63) (ASP102) [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, c.2, c.66, c.77, d.151, d.81, c.46