Tableau information
Concept source: d3ekea_ amino acid (a.a.) range (ASP18)(LYS71)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP18) (ASP28) H1
(PHE33) (ALA38) E2
(GLY48) (PHE56) H3
(LEU59) (LYS71) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 156.6° E2
H3 -53.7° -142.4° H3
H4 104.2° -55.1° 118.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1idoa_ : (TYR252) (VAL296) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) |Human (Homo sapiens) [TaxId: 9606]
d3kkeb_ : (ASP161) (VAL216) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d2be7a2 : (SER250) (LEU304) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Moritella profunda [TaxId: 111291]
d1okda_ : (PRO48) (SER94) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin I |Crithidia fasciculata [TaxId: 5656]
d1atza_ : (VAL1045) (VAL1085) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d3fj1d_ : (LEU216) (GLY253) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 246200]
d1gq3a2 : (ARG250) (VAL303) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d1fb5a2 : (ASN287) (THR343) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Sheep (Ovis aries) [TaxId: 9940]
d1gzda_ : (GLY188) (LYS240) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Pig (Sus scrofa) [TaxId: 9823]
d2acfc_ : (ILE205) (LEU253) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |automated matches |Sars coronavirus tor2 [TaxId: 227984]
d1w85c_ : (ILE86) (GLY124) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |Pyruvate dehydrogenase E1-alpha, PdhA |Bacillus stearothermophilus [TaxId: 1422]
d1rzra2 : (TYR161) (VAL217) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Glucose-resistance amylase regulator CcpA, C-terminal domain |Bacillus megaterium [TaxId: 1404]
d1tugc1 : (ARG250) (VAL303) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d3ekea_ : (ASP18) (LYS71) [view usage] : c.50.1.0 |Macro domain-like |Macro domain-like |automated matches |automated matches |Avian infectious bronchitis virus (strain beaudette) [TaxId: 11120]
d3dbic_ : (ASP164) (ALA220) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1do8a1 : (ILE280) (LYS340) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Mitochondrial NAD(P)-dependent malic enzyme |Human (Homo sapiens) [TaxId: 9606]
d1c9ya2 : (THR287) (THR343) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Ornithine transcarbamoylase |Human (Homo sapiens) [TaxId: 9606]
d3dvaa_ : (GLU82) (GLY124) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |automated matches |Bacillus stearothermophilus [TaxId: 1422]
d3vkuf1 : (ASP110) (VAL147) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Lactobacillus casei [TaxId: 1582]
d2acfb_ : (ILE205) (LEU253) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |automated matches |Sars coronavirus tor2 [TaxId: 227984]
d9atca2 : (ARG250) (ASN305) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d2fava_ : (ILE24) (LEU72) [view usage] : c.50.1.2 |Macro domain-like |Macro domain-like |Macro domain |automated matches |SARS coronavirus [TaxId: 227859]
d3dbia_ : (ASP164) (ALA220) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1ldna1 : (SER119) (ILE159) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Bacillus stearothermophilus [TaxId: 1422]
d1xcda_ : (GLY279) (GLN325) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |Decorin |Cow (Bos taurus) [TaxId: 9913]
d3dbib_ : (ASP164) (ALA220) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1h65b_ : (ASP105) (LYS156) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Chloroplast protein translocon GTPase Toc34 |Pea (Pisum sativum) [TaxId: 3888]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.10, c.2, c.80, c.93, c.37, c.36, c.47, c.62, c.78, c.50