Tableau information
Concept source: d2grja_ amino acid (a.a.) range (GLY113)(GLU146)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY113) (ASP119) H1
(ASP119) (SER127) E2
(ARG128) (ARG134) H3
(GLU137) (GLU146) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 124.9° E2
H3 94.4° 86.4° H3
H4 -84.5° -128.6° 137.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4oo0b_ : (GLY180) (ARG212) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1xyga2 : (CYS163) (ILE210) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |N-acetyl-gamma-glutamyl-phosphate reductase ArgC |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2o36a_ : (PRO157) (SER206) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Neurolysin (endopeptidase 24.16, thimet oligopeptidase) |Human (Homo sapiens) [TaxId: 9606]
d4ttpa_ : (ASN123) (ALA163) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d2hv8a_ : (PRO135) (ARG174) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1uj2a_ : (SER142) (THR187) [view usage] : c.37.1.6 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Phosphoribulokinase/pantothenate kinase |Uridine-cytidine kinase 2 |Human (Homo sapiens) [TaxId: 9606]
d4i1ua_ : (SER117) (GLN159) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
d1crla_ : (PRO135) (GLY173) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Type-B carboxylesterase/lipase |Fungus (Candida rugosa), formerly Cylindracea [TaxId: 5481]
d1jsma_ : (TYR98) (SER132) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d2grja_ : (GLY113) (GLU146) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Thermotoga maritima [TaxId: 2336]
d1ufqa_ : (SER142) (THR187) [view usage] : c.37.1.6 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Phosphoribulokinase/pantothenate kinase |Uridine-cytidine kinase 2 |Human (Homo sapiens) [TaxId: 9606]
d4ctha_ : (ASP294) (MET330) [view usage] : d.92.1.4 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neutral endopeptidase (neprilysin) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4f7wa_ : (PHE1218) (LEU1265) [view usage] : c.37.1.6 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Phosphoribulokinase/pantothenate kinase |automated matches |Klebsiella pneumoniae [TaxId: 507522]
d2ifaa1 : (PRO75) (PHE119) [view usage] : d.90.1.1 |FMN-dependent nitroreductase-like |FMN-dependent nitroreductase-like |NADH oxidase/flavin reductase |Hypothetical protein Smu.260 |Streptococcus mutans [TaxId: 1309]
d4jule_ : (TYR105) (SER136) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1vkja_ : (SER130) (LEU199) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Heparan sulfate 3-O-sulfotransferase |Mouse (Mus musculus) [TaxId: 10090]
d1zrha_ : (SER93) (LEU145) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j3ma_ : (ASP35) (LEU75) [view usage] : d.129.7.1 |TBP-like |TT1751-like |TT1751-like |Hypothetical protein TT1751 (TTHA1732) |Thermus thermophilus HB8 [TaxId: 300852]
d1f61a_ : (LYS331) (GLY387) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Isocitrate lyase |Mycobacterium tuberculosis [TaxId: 1773]
d1q3ta_ : (THR147) (HIS199) [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |CMP kinase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1qxha_ : (LEU87) (LEU130) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thiol peroxidase Tpx |Escherichia coli [TaxId: 562]
d4go9b1 : (PRO176) (GLN228) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Pseudomonas mesoacidophila [TaxId: 265293]
d1dmta_ : (ASP294) (VAL333) [view usage] : d.92.1.4 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neutral endopeptidase (neprilysin) |Neutral endopeptidase (neprilysin) |Human (Homo sapiens) [TaxId: 9606]
d1tgja_ : (THR4) (PRO36) [view usage] : g.17.1.2 |Cystine-knot cytokines |Cystine-knot cytokines |Transforming growth factor (TGF)-beta |TGF-beta3 |Human (Homo sapiens) [TaxId: 9606]
d4czjb2 : (GLY301) (HIS334) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
d1ej6d_ : (PRO137) (PHE183) [view usage] : i.7.1.1 |Reovirus components |Reovirus components |Reovirus components |Reovirus core |Reovirus sp. [TaxId: 10891]
d4i1va_ : (SER117) (ARG158) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
d2gnoa2 : (PRO134) (LEU166) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |gamma subunit of DNA polymerase III, N-domain |Thermotoga maritima [TaxId: 2336]
d4juka_ : (TYR105) (SER136) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
d1t8tb_ : (ALA225) (THR270) [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Heparan sulfate glucosamine 3-O-sulfotransferase 3 |Human (Homo sapiens) [TaxId: 9606]
d2uzqa_ : (GLY374) (ASP419) [view usage] : c.46.1.1 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Cell cycle control phosphatase, catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m32b_ : (SER190) (HIS236) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |2-aminoethylphosphonate transaminase |Salmonella typhimurium [TaxId: 90371]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, b.19, c.69, d.92, d.129, c.37, c.47, c.55, d.81, c.51, d.90, c.46, g.17, i.7