Tableau information
Concept source: d4nmha_ amino acid (a.a.) range (LYS238)(TYR284)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS238) (ARG252) H1
(SER254) (ASP259) E2
(LEU263) (GLY269) H3
(PRO271) (TYR284) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 164.7° E2
H3 -44.2° 135.9° H3
H4 -24.2° 168.1° 36.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2iyxa_ : (ARG125) (VAL168) [view usage] : c.37.1.2 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Shikimate kinase (AroK) |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3oz7b_ : (PHE187) (LYS229) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1c0aa2 : (ASN373) (GLY418) [view usage] : d.74.4.1 |DCoH-like |GAD domain-like |GAD domain |Prokaryotic AspRS, insert domain |Escherichia coli [TaxId: 562]
d2q6ia1 : (GLU17) (PHE61) [view usage] : c.132.1.0 |Bacterial fluorinating enzyme, N-terminal domain |Bacterial fluorinating enzyme, N-terminal domain |automated matches |automated matches |Salinispora tropica [TaxId: 369723]
d4ppya_ : (PRO70) (SER103) [view usage] : c.23.10.0 |Flavodoxin-like |SGNH hydrolase |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d4a0qb_ : (THR292) (ALA333) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3wyga_ : (THR139) (GLY172) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Saccharomyces cerevisiae [TaxId: 764097]
d1ee0b2 : (LEU292) (ALA331) [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Pyrone synthase (PyS, chalcone synthase 2) |Gerbera hybrid cultivar [TaxId: 18101]
d1n5wc2 : (ILE57) (LYS90) [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
d3t8yb_ : (ALA93) (ASP136) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1k8kd2 : (PRO206) (ARG279) [view usage] : d.198.2.1 |Secretion chaperone-like |Arp2/3 complex subunits |Arp2/3 complex subunits |ARPC2 (34 kDa subunit) |Cow (Bos taurus) [TaxId: 9913]
d4jd2h_ : (LYS97) (ALA139) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1i80a_ : (ASP9) (GLY46) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
d1qpva_ : (ASP106) (SER137) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Cofilin (actin depolymerizing factor, ADF) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ck4b_ : (THR296) (LEU338) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha1-beta1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1g2oa_ : (ASP9) (GLY46) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
d1vcoa2 : (PRO228) (GLY276) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |CTP synthase PyrG, N-terminal domain |Thermus thermophilus [TaxId: 274]
d2mbsa_ : (VAL42) (LEU81) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Klebsiella pneumoniae [TaxId: 507522]
d1yfra2 : (SER3) (GLY52) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Alanyl-tRNA synthetase (AlaRS) |Aquifex aeolicus [TaxId: 63363]
d3dwfb_ : (LYS238) (TYR284) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |11-beta-hydroxysteroid dehydrogenase 1 |Guinea pig (Cavia porcellus) [TaxId: 10141]
d1v7pc_ : (THR293) (ILE335) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha2-beta1 |Human (Homo sapiens) [TaxId: 9606]
d1h8la2 : (MET256) (ARG304) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase D, catalytic domain |Crested duck (Lophonetta specularioides) [TaxId: 8836]
d3t8ya_ : (ALA92) (ASP136) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1ck4a_ : (THR296) (PHE336) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha1-beta1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3r3ud_ : (PRO260) (ALA300) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.2, c.56, c.23, c.37, d.104, c.47, c.86, c.95, c.62, d.145, d.109, d.74, c.132, d.198