Tableau information
Concept source: d3wgea_ amino acid (a.a.) range (SER195)(LEU234)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER195) (ALA204) H1
(HIS208) (ALA214) E2
(CYS217) (LEU223) H3
(ALA224) (LEU234) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -156.5° E2
H3 55.9° -133.7° H3
H4 45.2° -158.2° -42.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3pc6a_ : (LEU596) (GLU615) [view usage] : c.15.1.1 |BRCT domain |BRCT domain |DNA-repair protein XRCC1 |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3lwba2 : (ASP151) (ARG186) [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3hu5a_ : (PRO166) (ARG195) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d1udma_ : (GLU110) (ALA139) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Coactosin-like protein Cotl1 (Clp) |Mouse (Mus musculus) [TaxId: 10090]
d1dk7a_ : (ASP283) (ALA312) [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Escherichia coli [TaxId: 562]
d1ehia2 : (ASP135) (GLU172) [view usage] : d.142.1.1 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |ATP-binding domain of peptide synthetases |D-alanine:D-lactate ligase VanA, C-domain |Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]
d1fuia2 : (ALA118) (LYS173) [view usage] : c.85.1.1 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |L-fucose isomerase, N-terminal and second domains |L-fucose isomerase, N-terminal and second domains |Escherichia coli [TaxId: 562]
d1vfqa_ : (GLU103) (LYS131) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3esab_ : (ASN152) (GLY212) [view usage] : c.69.1.30 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Cutinase-like |automated matches |Fusarium solani [TaxId: 70791]
d1jfra_ : (PRO181) (SER233) [view usage] : c.69.1.16 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Lipase |Lipase |Streptomyces exfoliatus [TaxId: 1905]
d1t3ya_ : (GLU103) (ALA132) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1iowa2 : (LYS97) (ALA136) [view usage] : d.142.1.1 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |ATP-binding domain of peptide synthetases |D-ala-D-ala ligase, C-domain |Escherichia coli, gene ddlB [TaxId: 562]
d2fy6a1 : (VAL33) (ASP83) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain |Neisseria meningitidis serogroup A [TaxId: 65699]
d1rdxa_ : (ALA301) (HIS334) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Fructose-1,6-bisphosphatase |Pig (Sus scrofa) [TaxId: 9823]
d3jsla_ : (SER231) (LEU273) [view usage] : d.142.2.2 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |Adenylation domain of NAD+-dependent DNA ligase |Adenylation domain of NAD+-dependent DNA ligase |Staphylococcus aureus [TaxId: 1280]
d2cn1a1 : (ALA235) (SER264) [view usage] : c.108.1.21 |HAD-like |HAD-like |Pyrimidine 5'-nucleotidase (UMPH-1) |Cytosolic 5'-nucleotidase III |Human (Homo sapiens) [TaxId: 9606]
d2r9va2 : (LYS203) (GLY247) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1knga_ : (ASP74) (GLY106) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin-like protein CcmG (CycY, DsbE) |Bradyrhizobium japonicum [TaxId: 375]
d1iova2 : (LYS97) (ALA136) [view usage] : d.142.1.1 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |ATP-binding domain of peptide synthetases |D-ala-D-ala ligase, C-domain |Escherichia coli, gene ddlB [TaxId: 562]
d3nbzc_ : (VAL137) (GLY170) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1oxwa_ : (MSE298) (ALA384) [view usage] : c.19.1.3 |FabD/lysophospholipase-like |FabD/lysophospholipase-like |Patatin |Patatin |Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]
d1c4aa1 : (ILE268) (LEU314) [view usage] : c.96.1.1 |Fe-only hydrogenase |Fe-only hydrogenase |Fe-only hydrogenase |Fe-only hydrogenase, catalytic domain |Clostridium pasteurianum [TaxId: 1501]
d3lwbb2 : (ASP151) (ARG186) [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2gq0b_ : (SER444) (THR473) [view usage] : d.14.1.0 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1wn2a_ : (LEU90) (LEU118) [view usage] : c.131.1.0 |Peptidyl-tRNA hydrolase II |Peptidyl-tRNA hydrolase II |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d2lnsa_ : (PRO120) (LYS169) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wnja_ : (GLU106) (GLY136) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Coactosin-like protein Cotl1 (Clp) |Human (Homo sapiens) [TaxId: 9606]
d2bkua_ : (VAL137) (GLY170) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Dog (Canis familiaris) [TaxId: 9615]
d4ag7b_ : (ASP6) (GLY35) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d4ag7a_ : (ALA7) (GLY35) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1ahua2 : (SER17) (LEU70) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |Vanillyl-alcohol oxidase |Fungus (Penicillium simplicissimum) [TaxId: 69488]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.108, c.37, c.47, d.14, c.85, e.7, d.108, c.8, c.19, c.33, d.142, d.145, d.109, c.15, c.96, c.131