Tableau information
Concept source: d4fshb2 amino acid (a.a.) range (THR214)(PHE263)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR214) (LYS224) H1
(PRO226) (GLY230) E2
(GLY230) (ALA247) H3
(TYR252) (PHE263) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -161.8° E2
H3 123.2° -44.6° H3
H4 -88.8° 93.2° 130.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4im4a_ : (ALA57) (GLY83) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d2hk8c2 : (THR219) (VAL264) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase AroE |Aquifex aeolicus [TaxId: 63363]
d1dy3a_ : (HIS72) (ALA151) [view usage] : d.58.30.1 |Ferredoxin-like |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |Escherichia coli [TaxId: 562]
d1uuqa_ : (MET265) (TRP301) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Exomannosidase |Cellvibrio mixtus [TaxId: 39650]
d2f9ja1 : (ILE67) (GLY118) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Pre-mRNA branch site protein p14 |Human (Homo sapiens) [TaxId: 9606]
d2gixa_ : (GLY257) (ASN289) [view usage] : b.1.18.16 |Immunoglobulin-like beta-sandwich |E set domains |Cytoplasmic domain of inward rectifier potassium channel |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3pwza2 : (THR221) (LEU267) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4kooc_ : (SER143) (LYS174) [view usage] : d.18.1.2 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |Plant transcriptional regulator PBF-2 |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1u4fa_ : (GLY257) (ASN289) [view usage] : b.1.18.16 |Immunoglobulin-like beta-sandwich |E set domains |Cytoplasmic domain of inward rectifier potassium channel |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1y8aa1 : (LYS261) (GLY308) [view usage] : c.108.1.24 |HAD-like |HAD-like |AF1437-like |Hypothetical protein AF1437 |Archaeoglobus fulgidus [TaxId: 2234]
d3amga_ : (PRO5) (GLY31) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1xx5a1 : (LYS12) (VAL67) [view usage] : d.111.1.1 |PR-1-like |PR-1-like |PR-1-like |automated matches |Chinese cobra (Naja atra) [TaxId: 8656]
d2ddba1 : (ASN4) (THR58) [view usage] : d.111.1.0 |PR-1-like |PR-1-like |automated matches |automated matches |Pseudechis porphyriacus [TaxId: 8671]
d4g3mb1 : (GLY108) (GLY144) [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Riboflavin biosynthesis protein RibD |Bacillus subtilis [TaxId: 1423]
d2q39a_ : (ASP130) (CYS160) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
d1xrsa_ : (ASN271) (ALA310) [view usage] : c.1.19.4 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |D-lysine 5,6-aminomutase alpha subunit, KamD |D-lysine 5,6-aminomutase alpha subunit, KamD |Clostridium sticklandii [TaxId: 1511]
d3ppha1 : (LYS149) (ILE196) [view usage] : c.1.22.0 |TIM beta/alpha-barrel |UROD/MetE-like |automated matches |automated matches |Yeast (Candida albicans) [TaxId: 5476]
d1h8ma_ : (PRO106) (PRO135) [view usage] : d.110.4.1 |Profilin-like |SNARE-like |Synatpobrevin N-terminal domain |Synaptobrevin homolog 1 ykt6 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4gnia2 : (ARG359) (GLU403) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
d2aeja2 : (TYR247) (ASP284) [view usage] : d.286.1.1 |TrkA C-terminal domain-like |TrkA C-terminal domain-like |TrkA C-terminal domain-like |Potassium channel-related protein MthK, C-terminal domain |Methanothermobacter thermautotrophicus [TaxId: 145262]
d1h70a_ : (PRO219) (SER251) [view usage] : d.126.1.3 |Pentein, beta/alpha-propeller |Pentein |Dimethylarginine dimethylaminohydrolase DDAH |Dimethylarginine dimethylaminohydrolase DDAH |Pseudomonas aeruginosa [TaxId: 287]
d1npyb1 : (THR219) (LYS270) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase-like protein HI0607 |Haemophilus influenzae [TaxId: 727]
d3azra_ : (PRO5) (GLY31) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1ahpa_ : (ALA660) (ASP700) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d3mk6c2 : (LEU329) (LEU366) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 3, PANK3 |Human (Homo sapiens) [TaxId: 9606]
d1u1ha1 : (ALA137) (ILE184) [view usage] : c.1.22.2 |TIM beta/alpha-barrel |UROD/MetE-like |Cobalamin-independent methionine synthase |5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2vpob_ : (SER250) (VAL310) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Halomonas elongata [TaxId: 2746]
d2gixb_ : (GLY257) (ASN289) [view usage] : b.1.18.16 |Immunoglobulin-like beta-sandwich |E set domains |Cytoplasmic domain of inward rectifier potassium channel |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, c.2, d.58, c.108, c.55, b.60, c.87, b.1, d.126, c.97, d.110, d.111, d.18, d.286