Protein Concepts Dictionary

Tableau information

Concept source:  d2ipja_  amino acid (a.a.) range (ARG258)(GLY298)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG258)  (GLY264) H1
	  (VAL267)  (SER271) E2
	  (ASN273)  (GLU285) H3
	  (THR289)  (GLY298) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
E2     -159.1°   E2                   
H3      -35.9°  156.6°   H3            
H4     -107.6°   73.2° -127.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ihia_ :   (THR251)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |3-alpha-hydroxysteroid dehydrogenase |Human (Homo sapiens), type III [TaxId: 9606]
 d1veqa_ :    (SER10)   (ARG90)   [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Mycobacterium smegmatis [TaxId: 1772]
 d3fx4a_ :   (SER244)  (ASN293)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Pig (Sus scrofa) [TaxId: 9823]
 d1afsa_ :   (THR251)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |3-alpha-hydroxysteroid dehydrogenase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2he8b_ :   (ARG258)  (ASP297)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2bgsa_ :   (THR240)  (SER287)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Barley (Hordeum vulgare) [TaxId: 4513]
 d3c3ua_ :   (ARG258)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1s1ra_ :   (THR251)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Prostaglandin d2 11-ketoreductase (akr1c3) |Human (Homo sapiens) [TaxId: 9606]
 d2ipja_ :   (ARG258)  (GLY298)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |3-alpha-hydroxysteroid dehydrogenase |Human (Homo sapiens), type III [TaxId: 9606]
 d1hqta_ :   (SER244)  (ALA291)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Pig (Sus scrofa) [TaxId: 9823]
 d3o3ra_ :   (ARG251)  (SER291)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2ipga_ :   (ARG258)  (ASP297)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3fjnb_ :   (ARG258)  (ASP297)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3qkza_ :   (ARG251)  (SER291)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,    a.25