Tableau information
Concept source: d3q29a_ amino acid (a.a.) range (PRO316)(SER370)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO316) (GLY328) H1
(GLY328) (ILE334) E2
(MET337) (GLY354) H3
(THR357) (SER370) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -63.4° E2
H3 98.9° 126.1° H3
H4 -81.2° 44.1° 168.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1n3wa_ : (ASP314) (ILE368) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d4jkmd_ : (PRO324) (SER379) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d2hqya1 : (GLN139) (ASN200) [view usage] : d.108.1.4 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |FemXAB nonribosomal peptidyltransferases |Hypothetical protein BT3689 |Bacteroides thetaiotaomicron [TaxId: 818]
d4mpoa_ : (ASP108) (PHE148) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Chlamydia trachomatis [TaxId: 471472]
d1svxb_ : (PRO315) (GLY369) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d2zyna_ : (ASN338) (GLN393) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d3hyla1 : (ASN53) (PHE92) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1mpba_ : (PRO315) (LYS370) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d4hs7a_ : (ASN353) (PRO415) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
d1r6za2 : (ASP313) (ALA369) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d2o5fb_ : (ASN130) (ARG168) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Hypothetical protein DR0079 |Deinococcus radiodurans str. R1 (Deinococcus radiodurans R1) [TaxId: 243230]
d4mpoe_ : (ASP108) (SER145) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Chlamydia trachomatis [TaxId: 471472]
d2hyii2 : (LEU248) (ILE277) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Probable ATP-dependent RNA helicase DDX48 |Human (Homo sapiens) [TaxId: 9606]
d1r6zz2 : (ASP313) (ALA369) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d2fnca_ : (ASN317) (GLY378) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3puve_ : (PRO315) (SER374) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1itza1 : (ASN63) (GLN102) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Maize (Zea mays) [TaxId: 4577]
d2r5na2 : (ASN51) (PHE90) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Escherichia coli [TaxId: 562]
d4mpob_ : (ASP108) (SER145) [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Chlamydia trachomatis [TaxId: 471472]
d2fkba1 : (GLN131) (ARG167) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Hypothetical protein YfcD |Escherichia coli [TaxId: 562]
d2zyka_ : (ASN338) (LYS396) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d1sgwa_ : (LYS69) (GLU115) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Putative ABC transporter PF0895 |Pyrococcus furiosus [TaxId: 2261]
d1gpua1 : (ASN54) (PHE93) [view usage] : c.36.1.10 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like PP module |Transketolase (TK), PP module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1mdqa_ : (PRO316) (ARG368) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1y5ya_ : (PRO105) (LYS160) [view usage] : d.14.1.12 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Formaldehyde-activating enzyme, FAE |Formaldehyde-activating enzyme, FAE |Methylobacterium extorquens [TaxId: 408]
d1t27a_ : (PRO131) (PHE164) [view usage] : d.129.3.4 |TBP-like |Bet v1-like |Phoshatidylinositol transfer protein, PITP |Phoshatidylinositol transfer protein, PITP |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2i5ra_ : (ARG72) (MET114) [view usage] : c.136.1.1 |Toprim domain |Toprim domain |Toprim domain |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, d.129, c.37, c.36, d.14, d.108, d.113, c.136