Tableau information
Concept source: d3qyta2 amino acid (a.a.) range (GLU594)(LEU662)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU594) (PHE608) H1
(CYS637) (ASP643) E2
(THR646) (GLY652) H3
(GLU654) (LEU662) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -155.8° E2
H3 -41.8° 120.2° H3
H4 111.1° -90.2° 112.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4hl6a_ : (ALA303) (ASN336) [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1n04a1 : (HIS283) (LYS333) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
d3fgsa_ : (LEU267) (GLU328) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4bn4a_ : (PRO350) (GLU390) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3w32a_ : (TYR813) (GLY873) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |EGF receptor tyrosine kinase, Erbb-1 |Human (Homo sapiens) [TaxId: 9606]
d2vzoa1 : (ASP67) (VAL112) [view usage] : b.18.1.0 |Galactose-binding domain-like |Galactose-binding domain-like |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 31958]
d1j8fc_ : (ASP294) (ALA354) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |Sirt2 histone deacetylase |Human (Homo sapiens) [TaxId: 9606]
d4hl6b_ : (ALA303) (ASN336) [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1ri1a_ : (PHE230) (GLY269) [view usage] : c.66.1.34 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap (Guanine N-7) methyltransferase |mRNA cap (Guanine N-7) methyltransferase |Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
d1ddta2 : (ASN152) (ALA187) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Diphtheria toxin, N-terminal domain |Corynebacterium diphtheriae [TaxId: 1717]
d1fqfa_ : (SER279) (GLU328) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d2gcaa2 : (GLY49) (ALA114) [view usage] : c.72.2.2 |Ribokinase-like |MurD-like peptide ligases, catalytic domain |Folylpolyglutamate synthetase |Folylpolyglutamate synthetase |Lactobacillus casei [TaxId: 1582]
d1qoqb_ : (SER143) (THR183) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
d1d8va_ : (LYS232) (THR255) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Beta-momorcharin |Bitter gourd (Momordica charantia) [TaxId: 3673]
d1sg4b_ : (PRO172) (ARG217) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) |Human (Homo sapiens) [TaxId: 9606]
d3ay6b_ : (ALA236) (GLY259) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Bacillus megaterium [TaxId: 1404]
d2o7ua_ : (LEU267) (GLU328) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4axhb1 : (GLU194) (SER233) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
d1oqga_ : (LEU267) (GLU328) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1gu7a2 : (SER309) (GLY348) [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |2,4-dienoyl-CoA reductase |Yeast (Candida tropicalis) [TaxId: 5482]
d1jh3a_ : (THR11) (ASN56) [view usage] : d.66.1.4 |Alpha-L RNA-binding motif |Alpha-L RNA-binding motif |Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain |Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
d1wq8a_ : (PHE5) (ASP33) [view usage] : g.17.1.1 |Cystine-knot cytokines |Cystine-knot cytokines |Platelet-derived growth factor-like |Vascular endothelial growth factor, VEGF |Aspic viper (Vipera aspis aspis) [TaxId: 8706]
d2vzsa4 : (ASP67) (VAL112) [view usage] : b.18.1.5 |Galactose-binding domain-like |Galactose-binding domain-like |beta-Galactosidase/glucuronidase, N-terminal domain |Exochitosanase CsxA |Amycolatopsis orientalis [TaxId: 31958]
d4hl6d_ : (ALA303) (ASN336) [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d2x05a1 : (ASP67) (VAL112) [view usage] : b.18.1.5 |Galactose-binding domain-like |Galactose-binding domain-like |beta-Galactosidase/glucuronidase, N-terminal domain |Exochitosanase CsxA |Amycolatopsis orientalis [TaxId: 31958]
d1y4zb1 : (ASN451) (GLY475) [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Respiratory nitrate reductase 1 beta chain |Escherichia coli [TaxId: 562]
d4bv3a_ : (PRO350) (THR391) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3orse_ : (GLY93) (GLN156) [view usage] : c.23.8.0 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |automated matches |automated matches |Staphylococcus aureus [TaxId: 426430]
d3p5mb_ : (SER160) (THR209) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d2p8ta2 : (PRO149) (VAL199) [view usage] : d.74.4.2 |DCoH-like |GAD domain-like |PH0730 C-terminal domain-like |Hypothetical protein PH0730 |Pyrococcus horikoshii [TaxId: 53953]
d1fqea_ : (LEU267) (GLU328) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1ryoa_ : (LEU267) (ARG327) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d3ay6a_ : (SER233) (GLY259) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Bacillus megaterium [TaxId: 1404]
d4r9va_ : (HIS301) (VAL334) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Photobacterium damselae [TaxId: 38293]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.123, c.94, c.2, d.58, c.79, d.157, c.66, c.14, d.165, c.72, c.23, d.144, d.166, b.18, c.87, c.31, d.74, g.17, d.66