Tableau information
Concept source: d4p3xa_ amino acid (a.a.) range (ALA127)(PRO163)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA127) (LEU134) H1
(SER137) (PRO143) E2
(ARG145) (LYS154) H3
(LYS157) (PRO163) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 145.9° E2
H3 -57.4° 156.3° H3
E4 119.7° -26.9° -176.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2qvca_ : (ASN135) (GLU193) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d2fz4a1 : (LEU189) (THR225) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DNA repair protein RAD25 |Archaeoglobus fulgidus [TaxId: 2234]
d1ggoa2 : (ILE436) (SER469) [view usage] : c.8.1.1 |The "swivelling" beta/beta/alpha domain |Phosphohistidine domain |Pyruvate phosphate dikinase, central domain |Pyruvate phosphate dikinase, central domain |Clostridium symbiosum [TaxId: 1512]
d1up7a1 : (PHE117) (CYS162) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |6-phospho-beta-glucosidase |Thermotoga maritima [TaxId: 2336]
d2xvza_ : (THR124) (GLU184) [view usage] : c.92.1.0 |Chelatase-like |Chelatase |automated matches |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d3a6ha_ : (ASP91) (SER152) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |automated matches |Pseudomonas putida [TaxId: 303]
d1qgoa_ : (SER116) (ALA173) [view usage] : c.92.1.2 |Chelatase-like |Chelatase |Cobalt chelatase CbiK |Cobalt chelatase CbiK |Salmonella typhimurium [TaxId: 90371]
d1qo5e_ : (VAL253) (GLY302) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Human (Homo sapiens), liver isozyme [TaxId: 9606]
d3ct6a1 : (ASP47) (ASN89) [view usage] : c.54.1.2 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |DhaM-like |PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM |Lactococcus lactis [TaxId: 1358]
d1g59a2 : (TYR187) (PRO234) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutamyl-tRNA synthetase (GluRS) |Thermus thermophilus [TaxId: 274]
d1u7xa_ : (VAL146) (PRO194) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Methanococcus jannaschii [TaxId: 2190]
d3w01a_ : (SER20) (ILE66) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |PcrB protein homolog YerE |Staphylococcus aureus [TaxId: 418127]
d4mzya2 : (ILE141) (ASN188) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Putative nicotinate phosphoribosyltransferase EF2626 |Enterococcus faecalis [TaxId: 1351]
d4hyra2 : (ASP180) (PRO232) [view usage] : c.1.11.2 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |D-glucarate dehydratase-like |automated matches |Acidaminococcus sp. [TaxId: 563191]
d2cfoa1 : (TYR192) (PRO239) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Synechococcus elongatus [TaxId: 32046]
d4p3xa_ : (ALA127) (PRO163) [view usage] : c.145.1.0 |NadA-like |NadA-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1alda_ : (VAL253) (ARG303) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Human (Homo sapiens), muscle isozyme [TaxId: 9606]
d3ximc_ : (VAL151) (GLU217) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Actinoplanes missouriensis [TaxId: 1866]
d1lama2 : (ALA91) (LEU145) [view usage] : c.50.1.1 |Macro domain-like |Macro domain-like |Leucine aminopeptidase (Aminopeptidase A), N-terminal domain |Leucine aminopeptidase (Aminopeptidase A), N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d1ir6a_ : (ASP292) (GLN364) [view usage] : c.107.1.2 |DHH phosphoesterases |DHH phosphoesterases |Exonuclease RecJ |Exonuclease RecJ |Thermus thermophilus [TaxId: 274]
d4hjrb_ : (PRO152) (PRO194) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1ks9a2 : (PRO58) (HIS97) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Ketopantoate reductase PanE |Escherichia coli [TaxId: 562]
d1lvwb_ : (ILE34) (GLU81) [view usage] : c.68.1.6 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |glucose-1-phosphate thymidylyltransferase |RmlA (RfbA) |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1euca1 : (THR63) (ILE103) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain |Pig (Sus scrofa) [TaxId: 9823]
d3afha1 : (TYR198) (PRO245) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1q3ka_ : (ASP91) (SER152) [view usage] : c.125.1.1 |Creatininase |Creatininase |Creatininase |Creatininase |Pseudomonas putida [TaxId: 303]
d1j09a2 : (TYR187) (PRO234) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Glutamyl-tRNA synthetase (GluRS) |Thermus thermophilus [TaxId: 274]
d3sajc_ : (THR163) (ASN214) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3fdja_ : (ILE62) (ASP111) [view usage] : c.119.1.0 |DAK1/DegV-like |DAK1/DegV-like |automated matches |automated matches |Eubacterium eligens [TaxId: 39485]
d2xvxa_ : (THR124) (GLU184) [view usage] : c.92.1.0 |Chelatase-like |Chelatase |automated matches |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d3hjea1 : (HIS208) (LYS250) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d1up6a1 : (PHE117) (CYS162) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |6-phospho-beta-glucosidase |Thermotoga maritima [TaxId: 2336]
d2yy5b_ : (GLY129) (ASN185) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Mycoplasma pneumoniae [TaxId: 272634]
d1dxia_ : (VAL151) (GLU217) [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces murinus [TaxId: 33900]
d1vbna_ : (SER169) (PRO226) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Escherichia coli [TaxId: 562]
d1up4a1 : (PHE117) (CYS162) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |6-phospho-beta-glucosidase |Thermotoga maritima [TaxId: 2336]
d1itca2 : (ASN27) (ILE86) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Bacterial beta-amylase |Bacillus cereus [TaxId: 1396]
d1dp4a_ : (TYR196) (ASP242) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Hormone binding domain of the atrial natriuretic peptide receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3ro8a_ : (TYR167) (GLY233) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Paenibacillus sp. [TaxId: 324057]
d1c4aa1 : (SER323) (THR380) [view usage] : c.96.1.1 |Fe-only hydrogenase |Fe-only hydrogenase |Fe-only hydrogenase |Fe-only hydrogenase, catalytic domain |Clostridium pasteurianum [TaxId: 1501]
d1zxya2 : (THR171) (TYR217) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Anthranilate phosphoribosyltransferase (TrpD) |Sulfolobus solfataricus [TaxId: 2287]
d1t34a_ : (TYR196) (HIS240) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Hormone binding domain of the atrial natriuretic peptide receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3orse_ : (ALA51) (PRO85) [view usage] : c.23.8.0 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |automated matches |automated matches |Staphylococcus aureus [TaxId: 426430]
d1yixa1 : (ASP21) (CYS64) [view usage] : c.1.9.12 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |TatD Mg-dependent DNase-like |Putative deoxyribonuclease YcfH |Escherichia coli [TaxId: 562]
d3gdra_ : (ARG111) (MET149) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2f7fa1 : (ILE141) (ASN188) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Putative nicotinate phosphoribosyltransferase EF2626 |Enterococcus faecalis [TaxId: 1351]
d2vf4x_ : (LYS452) (ALA498) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Escherichia coli [TaxId: 562]
d3h5va_ : (ASP168) (ILE215) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Ionotropic glutamate receptor 2 (GluR2) amino-terminal domain (ATD) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1skyb3 : (GLN186) (THR225) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Central domain of alpha subunit of F1 ATP synthase |Bacillus sp., strain ps3 [TaxId: 1409]
d1jiia_ : (THR171) (THR220) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tyrosyl-tRNA synthetase (TyrRS) |Staphylococcus aureus [TaxId: 1280]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, c.68, c.26, c.92, c.80, c.93, c.23, c.37, c.107, c.8, c.50, c.125, c.54, c.27, c.119, c.96, c.145