Tableau information
Concept source: d1wpya2 amino acid (a.a.) range (THR6)(ASP40)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR6) (ARG11) H1
(ARG11) (GLN17) E2
(SER21) (THR28) H3
(GLY34) (ASP40) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 37.7° E2
H3 92.6° 130.2° H3
E4 -53.2° -16.9° 144.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1vp5a_ : (ARG70) (ILE111) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |2,5-diketo-D-gluconic acid reductase A |Thermotoga maritima [TaxId: 2336]
d2e41a2 : (THR6) (ASP40) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d1n73c1 : (ASP140) (LEU173) [view usage] : d.171.1.1 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domains |Sea lamprey (Petromyzon marinus), gamma [TaxId: 7757]
d1gxla_ : (LEU538) (PRO572) [view usage] : d.215.1.1 |Smc hinge domain |Smc hinge domain |Smc hinge domain |Smc hinge domain |Thermotoga maritima [TaxId: 2336]
d1gxld_ : (LEU538) (PRO572) [view usage] : d.215.1.1 |Smc hinge domain |Smc hinge domain |Smc hinge domain |Smc hinge domain |Thermotoga maritima [TaxId: 2336]
d2dxta1 : (THR6) (ASP40) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d1wnla2 : (THR6) (ASP40) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d4lkba_ : (THR58) (PRO107) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Nostoc sp. [TaxId: 103690]
d2df4b2 : (LEU141) (PRO199) [view usage] : d.128.1.5 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |GatB/GatE catalytic domain-like |Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain |Staphylococcus aureus [TaxId: 1280]
d4jq1a_ : (LYS75) (ILE116) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |3-alpha-hydroxysteroid dehydrogenase |Human (Homo sapiens), type III [TaxId: 9606]
d1vp5b_ : (ARG70) (ILE111) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |2,5-diketo-D-gluconic acid reductase A |Thermotoga maritima [TaxId: 2336]
d1wpya2 : (THR6) (ASP40) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d2dxua1 : (THR6) (ASP40) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d2deqa1 : (THR6) (ASP40) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d2djza1 : (THR6) (ASP40) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d2dvea1 : (THR6) (ASP40) [view usage] : d.104.1.2 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Biotin holoenzyme synthetase |Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain |Pyrococcus horikoshii [TaxId: 53953]
d4dbsb_ : (LYS75) (ILE116) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Prostaglandin d2 11-ketoreductase (akr1c3) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, d.104, d.171, d.128, d.80, d.215