Tableau information
Concept source: d2xxwa_ amino acid (a.a.) range (ASN721)(GLY757)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN721) (LEU729) H1
(ASP732) (GLU738) E2
(GLU738) (ASN749) H3
(ASN751) (GLY757) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -149.3° E2
H3 -44.4° 131.9° H3
E4 111.2° -57.4° -150.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1lb8b_ : (THR173) (GLY213) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d1a7lb_ : (TYR210) (THR245) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1aora2 : (PRO165) (GLY205) [view usage] : d.152.1.1 |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase, N-terminal domain |Aldehyde ferredoxin oxidoreductase |Pyrococcus furiosus [TaxId: 2261]
d1heib2 : (LEU356) (ARG393) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |HCV helicase domain |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
d2y7rc_ : (LEU138) (ARG165) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia sp. [TaxId: 233098]
d4kr5b_ : (ALA399) (ILE435) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Lactococcus lactis [TaxId: 272623]
d1sqga2 : (ARG342) (GLU400) [view usage] : c.66.1.38 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |NOL1/NOP2/sun |Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain |Escherichia coli [TaxId: 562]
d4rpnd_ : (VAL139) (GLN164) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Sphingobium chlorophenolicum [TaxId: 46429]
d2xd2a_ : (ALA252) (THR289) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d1q0ub_ : (LEU60) (ILE111) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Probable DEAD box RNA helicase YqfR |Bacillus stearothermophilus [TaxId: 1422]
d1gnla_ : (GLY426) (TYR486) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d1usyh_ : (PRO50) (PHE79) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Thermotoga maritima [TaxId: 2336]
d4kfqb_ : (SER205) (GLU243) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |N-methyl-D-aspartate receptor subunit 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1y20a_ : (ALA206) (GLU243) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |N-methyl-D-aspartate receptor subunit 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1usye_ : (ASP48) (PHE79) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain |Thermotoga maritima [TaxId: 2336]
d1q0ua_ : (LEU60) (ILE111) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Probable DEAD box RNA helicase YqfR |Bacillus stearothermophilus [TaxId: 1422]
d4kfqa_ : (ALA206) (GLU243) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |N-methyl-D-aspartate receptor subunit 1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1w5sa2 : (ARG28) (ASN93) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |CDC6-like protein APE0152, N-terminal domain |Aeropyrum pernix [TaxId: 56636]
d4rnsa_ : (VAL139) (THR165) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Sphingobium chlorophenolicum [TaxId: 46429]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, c.66, c.37, e.26, d.152