Tableau information
Concept source: d1bfda3 amino acid (a.a.) range (PHE483)(VAL521)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE483) (GLY491) H1
(GLN493) (ASP498) E2
(LEU500) (ALA513) H3
(GLY515) (VAL521) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 173.2° E2
H3 13.5° -163.2° H3
E4 167.3° -19.1° -168.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ozlb1 : (ALA133) (ASN172) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |E1-beta subunit of pyruvate dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d2jbwa1 : (SER305) (GLY362) [view usage] : c.69.1.41 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |2,6-dihydropseudooxynicotine hydrolase-like |2,6-dihydropseudooxynicotine hydrolase |Arthrobacter nicotinovorans [TaxId: 29320]
d1fw8a_ : (LEU5) (ASN48) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1upbc3 : (ASP518) (PHE563) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d2ez4a3 : (SER503) (ALA542) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Lactobacillus plantarum [TaxId: 1590]
d1ybha3 : (MET601) (PRO642) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Acetohydroxyacid synthase catalytic subunit |Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]
d4dg5a_ : (LEU74) (GLU116) [view usage] : c.86.1.0 |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |automated matches |Staphylococcus aureus [TaxId: 282458]
d3dufb1 : (GLU133) (HIS172) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus stearothermophilus [TaxId: 1422]
d1ni4b1 : (ALA133) (ASN172) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |E1-beta subunit of pyruvate dehydrogenase, Pyr module |Human (Homo sapiens) [TaxId: 9606]
d1qs0a_ : (GLY262) (GLU303) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |2-oxoisovalerate dehydrogenase (E1B), PP module |Pseudomonas putida [TaxId: 303]
d1umbc_ : (THR220) (ARG266) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |Branched-chain alpha-keto acid dehydrogenase, PP module |Thermus thermophilus [TaxId: 274]
d3dyca_ : (THR224) (ALA260) [view usage] : c.76.1.1 |Alkaline phosphatase-like |Alkaline phosphatase-like |Alkaline phosphatase |Alkaline phosphatase |Escherichia coli [TaxId: 562]
d1ot5a2 : (TYR212) (TRP273) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Kexin, N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2ihuc3 : (ASP518) (TYR561) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d1powa3 : (SER503) (VAL543) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Pyruvate oxidase |Lactobacillus plantarum [TaxId: 1590]
d4pz0a_ : (GLU148) (GLU199) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Bacillus anthracis [TaxId: 198094]
d1ynha_ : (THR120) (SER163) [view usage] : d.126.1.7 |Pentein, beta/alpha-propeller |Pentein |Succinylarginine dihydrolase-like |automated matches |Escherichia coli [TaxId: 562]
d2lv3a_ : (ALA23) (GLU69) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3dvaa_ : (THR218) (THR263) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |automated matches |Bacillus stearothermophilus [TaxId: 1422]
d2lkua_ : (ALA2) (ASN54) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Western balsam poplar (Populus trichocarpa) [TaxId: 3694]
d2bp7a_ : (GLY262) (GLU303) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |automated matches |Pseudomonas putida [TaxId: 303]
d3exfa_ : (ASP212) (GLU254) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |E1-beta subunit of pyruvate dehydrogenase (PP module) |Human (Homo sapiens) [TaxId: 9606]
d2dj0a_ : (ASN13) (ASP66) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cq9a_ : (ALA15) (GLU58) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jhba_ : (GLU4) (THR49) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Glutaredoxin (Grx, thioltransferase) |Human (Homo sapiens) [TaxId: 9606]
d1ykaa_ : (SER2) (ASP51) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2djka1 : (GLY12) (ASP61) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Fungus (Humicola insolens) [TaxId: 34413]
d1jkua_ : (HIS209) (ASN244) [view usage] : a.25.1.3 |Ferritin-like |Ferritin-like |Manganese catalase (T-catalase) |Manganese catalase (T-catalase) |Lactobacillus plantarum [TaxId: 1590]
d2g25a1 : (HIS644) (THR691) [view usage] : c.36.1.6 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like Pyr module |Pyruvate dehydrogenase E1 component, Pyr module |Escherichia coli [TaxId: 562]
d3uiwb_ : (SER14) (GLU58) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1ja1b2 : (SER68) (ASP113) [view usage] : c.23.5.2 |Flavodoxin-like |Flavoproteins |Cytochrome p450 reductase N-terminal domain-like |NADPH-cytochrome p450 reductase, N-terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ynhb_ : (THR120) (SER163) [view usage] : d.126.1.7 |Pentein, beta/alpha-propeller |Pentein |Succinylarginine dihydrolase-like |automated matches |Escherichia coli [TaxId: 562]
d3fjoa1 : (ILE50) (ASP95) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1y9db3 : (PHE502) (ALA542) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Lactobacillus plantarum [TaxId: 1590]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.76, c.93, c.23, c.36, c.47, c.86, d.126, a.25, c.41