Tableau information
Concept source: d1vlhb_ amino acid (a.a.) range (LEU24)(GLY70)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU24) (ASP28) H1
(ASP28) (VAL34) E2
(THR45) (LEU57) H3
(GLY62) (GLY70) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 119.3° E2
H3 -89.8° 145.4° H3
E4 94.4° -36.0° 171.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1vl5a_ : (PHE60) (GLN96) [view usage] : c.66.1.41 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |UbiE/COQ5-like |Hypothetical protein BH2331 |Bacillus halodurans [TaxId: 86665]
d2bmib_ : (GLY92) (THR124) [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
d4l4za_ : (LEU135) (ILE172) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d2ewba1 : (GLY362) (GLU404) [view usage] : c.56.5.3 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Leucine aminopeptidase, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1dqra_ : (ASN314) (GLY380) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3o2ha_ : (ASP54) (LYS105) [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |Adaptor protein ClpS (YljA) |Escherichia coli [TaxId: 562]
d3nbub_ : (LEU313) (GLY378) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |automated matches |Escherichia coli [TaxId: 668369]
d1s1il_ : (ARG43) (LEU115) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ykwa1 : (GLU153) (ASP200) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Chlorobium tepidum [TaxId: 1097]
d3o2bc_ : (ARG57) (LYS105) [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2kcqa_ : (ASP63) (SER111) [view usage] : c.97.3.1 |Cytidine deaminase-like |JAB1/MPN domain |JAB1/MPN domain |SRU_2040 |Salinibacter ruber DSM 13855 [TaxId: 309807]
d2bkaa1 : (GLU5) (GLY51) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |TAT-interacting protein TIP30 |Human (Homo sapiens) [TaxId: 9606]
d1ej7l1 : (ILE155) (ASP203) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId: 4097]
d3dnjb_ : (SER67) (LYS118) [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |automated matches |Caulobacter vibrioides [TaxId: 155892]
d1blle2 : (GLY362) (GLU404) [view usage] : c.56.5.3 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Leucine aminopeptidase, C-terminal domain |Leucine aminopeptidase, C-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d3l6na_ : (SER106) (THR139) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Chryseobacterium indologenes [TaxId: 253]
d1ofda3 : (PRO51) (PRO111) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Alpha subunit of glutamate synthase, N-terminal domain |Synechocystis sp. [TaxId: 1143]
d1wmda2 : (GLY67) (SER129) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |Alkaline serine protease kp-43, N-terminal domain |Bacillus sp. KSM-KP43 [TaxId: 109322]
d3o2ba_ : (VAL55) (LYS105) [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1n0ua3 : (VAL627) (HIS694) [view usage] : d.14.1.1 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |Translational machinery components |Elongation factor 2 (eEF-2), domain IV |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1llwa3 : (GLN57) (PRO111) [view usage] : d.153.1.1 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Class II glutamine amidotransferases |Alpha subunit of glutamate synthase, N-terminal domain |Synechocystis sp. [TaxId: 1143]
d2j9aa1 : (GLY362) (GLU404) [view usage] : c.56.5.3 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Leucine aminopeptidase, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
d3sxea_ : (ASP103) (PHE152) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d2o2db_ : (VAL369) (GLY434) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
d2cara1 : (MET1) (ALA37) [view usage] : c.51.4.1 |Anticodon-binding domain-like |ITPase-like |ITPase (Ham1) |Inosine triphosphate pyrophosphatase, ITPase |Human (Homo sapiens) [TaxId: 9606]
d2v4md_ : (ASP542) (LEU589) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2zvic2 : (GLY129) (ASP178) [view usage] : c.1.14.0 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2o2cc_ : (VAL369) (GLY434) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
d4pgga2 : (ASP196) (LEU230) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Sorghum (Sorghum bicolor) [TaxId: 4558]
d3q1ha_ : (PHE32) (SER64) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d2o2ca_ : (VAL369) (GLY434) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
d2zvid2 : (GLY129) (ASP178) [view usage] : c.1.14.0 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1h1lb_ : (GLN213) (SER251) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Klebsiella pneumoniae [TaxId: 573]
d1rlda1 : (GLN156) (ASP203) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId: 4097]
d1j5sa_ : (LEU139) (PRO175) [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uronate isomerase TM0064 |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, i.1, c.68, c.26, c.56, c.92, d.157, c.66, c.80, c.124, d.153, d.14, c.71, c.97, c.41, c.51, d.45