Tableau information
Concept source: d3beoa_ amino acid (a.a.) range (THR71)(GLU122)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR71) (GLU89) H1
(ASP93) (HIS98) E2
(THR101) (GLN115) H3
(PRO117) (GLU122) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 153.0° E2
H3 -40.9° -162.2° H3
E4 134.9° -18.2° -162.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2jbwd_ : (ARG282) (ASP326) [view usage] : c.69.1.41 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |2,6-dihydropseudooxynicotine hydrolase-like |2,6-dihydropseudooxynicotine hydrolase |Arthrobacter nicotinovorans [TaxId: 29320]
d2f48a_ : (THR151) (PRO202) [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |automated matches |Borrelia burgdorferi [TaxId: 224326]
d1w4ra1 : (ALA85) (ALA122) [view usage] : c.37.1.24 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Type II thymidine kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tdfa2 : (ALA136) (ARG176) [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Thioredoxin reductase |Escherichia coli [TaxId: 562]
d1l2ta_ : (SER147) (VAL202) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |MJ0796 |Methanococcus jannaschii [TaxId: 2190]
d1a5ab_ : (ALA85) (GLY135) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
d4ig9e_ : (GLU420) (ASN465) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lwha2 : (THR252) (PHE311) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |4-alpha-glucanotransferase |Thermotoga maritima [TaxId: 2336]
d1dk7a_ : (LEU234) (LYS277) [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Escherichia coli [TaxId: 562]
d2m6ra_ : (ILE68) (GLY120) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Escherichia coli [TaxId: 469008]
d1mv8a3 : (GLN302) (ARG354) [view usage] : c.26.3.1 |Adenine nucleotide alpha hydrolase-like |UDP-glucose/GDP-mannose dehydrogenase C-terminal domain |UDP-glucose/GDP-mannose dehydrogenase C-terminal domain |GDP-mannose 6-dehydrogenase, GDP-binding domain |Pseudomonas aeruginosa [TaxId: 287]
d1lpab2 : (TYR114) (ASP176) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1sq0a_ : (ASN633) (SER678) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Human (Homo sapiens) [TaxId: 9606]
d2a0kb_ : (GLU53) (SER106) [view usage] : c.23.14.1 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |N-deoxyribosyltransferase |Nucleoside 2-deoxyribosyltransferase |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d3tgla_ : (LYS109) (GLY175) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |Triacylglycerol lipase |Rhizomucor miehei [TaxId: 4839]
d1vi5c_ : (ILE48) (GLY97) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d4o0la_ : (HIS140) (GLY211) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhodotorula mucilaginosa [TaxId: 5537]
d2jbwb_ : (ARG282) (ASP326) [view usage] : c.69.1.41 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |2,6-dihydropseudooxynicotine hydrolase-like |2,6-dihydropseudooxynicotine hydrolase |Arthrobacter nicotinovorans [TaxId: 29320]
d3tqka_ : (LYS249) (GLU307) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Francisella tularensis [TaxId: 119856]
d1xvia_ : (GLY187) (ILE230) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) |Escherichia coli [TaxId: 562]
d4bj3b_ : (PHE224) (ALA281) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3b4ua_ : (SER150) (ASP194) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d4i5ia_ : (GLU420) (ASN465) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xzmb_ : (ILE46) (SER96) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d3stgb_ : (CYS98) (PRO136) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |automated matches |Neisseria meningitidis [TaxId: 122586]
d3p1tc_ : (ILE76) (GLY117) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d1ohva_ : (LYS232) (GLU299) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |4-aminobutyrate aminotransferase, GABA-aminotransferase |Pig (Sus scrofa) [TaxId: 9823]
d1xg5c_ : (THR111) (GLY199) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Putative dehydrogenase ARPG836 (MGC4172) |Human (Homo sapiens) [TaxId: 9606]
d1seia_ : (ASP4) (GLU52) [view usage] : d.140.1.1 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Ribosomal protein S8 |Bacillus stearothermophilus [TaxId: 1422]
d3gbva_ : (TYR112) (ASP158) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]
d3muy13 : (SER519) (ASP569) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1gpla2 : (TYR114) (ASP176) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Guinea pig (Cavia porcellus) [TaxId: 10141]
d4jhla_ : (LEU110) (THR172) [view usage] : c.23.10.0 |Flavodoxin-like |SGNH hydrolase |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
d1xuua2 : (GLY197) (ASP239) [view usage] : c.1.10.6 |TIM beta/alpha-barrel |Aldolase |NeuB-like |Capsule biosynthesis protein SiaC, N-terminal domain |Neisseria meningitidis [TaxId: 487]
d3p1ta_ : (GLY75) (GLY117) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d1bw9b1 : (ALA550) (THR606) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
d1xvib_ : (GLY187) (LEU234) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) |Escherichia coli [TaxId: 562]
d3ls2a_ : (ASN118) (SER171) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Pseudoalteromonas haloplanktis [TaxId: 326442]
d1y7he_ : (LEU60) (ALA105) [view usage] : c.69.1.20 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Hydroxynitrile lyase-like |Salicylic acid-binding protein 2 (SABP2) |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1ydfa1 : (ILE187) (THR228) [view usage] : c.108.1.14 |HAD-like |HAD-like |NagD-like |Putative hydrolase SP1407 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d3k92a2 : (ALA199) (ALA253) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1gwja_ : (ARG217) (GLU276) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Morphinone reductase |Pseudomonas putida [TaxId: 303]
d3hsyb_ : (LYS112) (ASN158) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Ionotropic glutamate receptor 2 (GluR2) amino-terminal domain (ATD) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3dnfb_ : (ASN194) (ILE241) [view usage] : c.155.1.1 |LytB-like |LytB-like |LytB-like |LytB |Aquifex aeolicus [TaxId: 63363]
d2hyda1 : (SER479) (VAL532) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |Putative multidrug export ATP-binding/permease protein SAV1866 |Staphylococcus aureus [TaxId: 1280]
d1vl6a1 : (GLN157) (ARG212) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Malate oxidoreductase (malic enzyme) |Thermotoga maritima [TaxId: 2336]
d1n2za_ : (LEU71) (ALA109) [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Vitamin B12 binding protein BtuF |Escherichia coli [TaxId: 562]
d1odtc_ : (TYR150) (TYR204) [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |Cephalosporin C deacetylase |Bacillus subtilis [TaxId: 1423]
d3gz4a_ : (LEU133) (GLY194) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 217992]
d3p1td_ : (GLY75) (GLY117) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d1dp4a_ : (VAL131) (PHE188) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Hormone binding domain of the atrial natriuretic peptide receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3p1tb_ : (GLY75) (GLY117) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d1jr2a_ : (ALA122) (ALA172) [view usage] : c.113.1.1 |HemD-like |HemD-like |HemD-like |Uroporphyrinogen III synthase (U3S, HemD) |Human (Homo sapiens) [TaxId: 9606]
d3grob_ : (ASN87) (GLY140) [view usage] : c.69.1.13 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Thioesterases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t34a_ : (SER129) (PHE188) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Hormone binding domain of the atrial natriuretic peptide receptor |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3d1ja_ : (ASN106) (VAL160) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3copa_ : (ASP105) (VAL160) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2oofa2 : (SER221) (GLU267) [view usage] : c.1.9.17 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Imidazolonepropionase-like |Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 |Environmental samples
d1yzhb_ : (TYR132) (ASP179) [view usage] : c.66.1.53 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TrmB-like |tRNA (guanine-N(7)-)-methyltransferase TrmB |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1n1ma2 : (GLU602) (ALA654) [view usage] : c.69.1.24 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |DPP6 catalytic domain-like |Dipeptidyl peptidase IV/CD26, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3mcwa_ : (LEU103) (ASP145) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 243365]
d4ba4a_ : (THR196) (GLU260) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d1qk3a_ : (GLY49) (VAL113) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Hypoxanthine-guanine-xanthine PRTase |Toxoplasma gondii [TaxId: 5811]
d4jt8a_ : (PRO299) (ASN344) [view usage] : c.31.1.0 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1y9db3 : (ALA373) (THR415) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Lactobacillus plantarum [TaxId: 1590]
d1srva_ : (VAL230) (LYS277) [view usage] : c.8.5.1 |The "swivelling" beta/beta/alpha domain |GroEL apical domain-like |GroEL-like chaperone, apical domain |GroEL, A domain |Thermus thermophilus [TaxId: 274]
d1l2tb_ : (SER1147) (VAL1202) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |MJ0796 |Methanococcus jannaschii [TaxId: 2190]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.69, c.2, i.1, c.108, c.79, c.26, c.92, c.66, c.93, c.113, c.23, c.37, c.36, c.89, c.87, c.31, c.62, c.8,
d.140, c.33, c.61, c.3, c.155