Tableau information
Concept source: d3u2oa_ amino acid (a.a.) range (GLN165)(VAL213)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN165) (GLY175) H1
(LEU178) (LYS184) E2
(ASP190) (VAL201) H3
(TYR208) (VAL213) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -117.0° E2
H3 -89.2° 153.5° H3
E4 97.5° -25.0° 166.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1wpqa1 : (ALA153) (GLN192) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1whba_ : (THR18) (PRO56) [view usage] : c.46.1.4 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Human (Homo sapiens) [TaxId: 9606]
d1g8oa_ : (ASN114) (MET166) [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
d2v4ma_ : (ILE378) (LEU418) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2gwfe_ : (THR184) (PRO222) [view usage] : c.46.1.4 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Human (Homo sapiens) [TaxId: 9606]
d2gwfc_ : (THR184) (PRO222) [view usage] : c.46.1.4 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Human (Homo sapiens) [TaxId: 9606]
d1i5pa2 : (ARG434) (ARG470) [view usage] : b.77.2.1 |beta-Prism I |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |delta-Endotoxin (insectocide), middle domain |Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]
d1y8ca_ : (LEU56) (GLN92) [view usage] : c.66.1.43 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |CAC2371-like |Putative methyltransferase CAC2371 |Clostridium acetobutylicum [TaxId: 1488]
d1h4kx2 : (SER150) (GLU194) [view usage] : c.46.1.2 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Multidomain sulfurtransferase (rhodanese) |Sulfurtransferase |Azotobacter vinelandii [TaxId: 354]
d2bjqa2 : (GLY68) (TRP99) [view usage] : b.169.1.1 |MFPT repeat-like |MFPT repeat-like |MFPT repeat |Sperm motility protein MFP2 |Pig roundworm (Ascaris suum), isoform A [TaxId: 6253]
d1ac5a_ : (PHE162) (ASN212) [view usage] : c.69.1.5 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Serine carboxypeptidase-like |Serine carboxypeptidase II |Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
d3riqa_ : (SER135) (ILE168) [view usage] : b.80.1.0 |Single-stranded right-handed beta-helix |Pectin lyase-like |automated matches |automated matches |Siphovirus 9na
d1x0xa1 : (ALA153) (GLN192) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ajea_ : (PRO69) (GLY114) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |CDC42 |Human (Homo sapiens) [TaxId: 9606]
d3tbfa_ : (LYS288) (ILE328) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Francisella tularensis [TaxId: 119856]
d3srga_ : (ASN287) (VAL319) [view usage] : b.68.6.2 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |Serum paraoxonase/arylesterase 1, PON1 |Serum paraoxonase/arylesterase 1, PON1 |Artificial gene [TaxId: 32630]
d1iula_ : (ASN2) (ASN47) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Hypothetical protein TT1466 |Thermus thermophilus [TaxId: 274]
d1asta_ : (GLY5) (PRO47) [view usage] : d.92.1.8 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Astacin |Astacin |European fresh water crayfish (Astacus astacus) [TaxId: 6715]
d1z82b1 : (ALA131) (CYS166) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1onra_ : (ASP3) (PRO36) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
d2fgea2 : (LEU950) (LYS993) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Presequence protease 1, PREP1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3k96a1 : (ALA141) (ASP180) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Coxiella burnetii [TaxId: 227377]
d3trga_ : (THR2) (HIS46) [view usage] : d.58.10.0 |Ferredoxin-like |Acylphosphatase/BLUF domain-like |automated matches |automated matches |Coxiella burnetii [TaxId: 227377]
d3cwna_ : (LYS4) (PRO36) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 562]
d2plaa1 : (ALA155) (ASP194) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4orsa_ : (GLY138) (GLN182) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1x0va1 : (ALA153) (GLN192) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1iuka_ : (ASP3) (ASN47) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Hypothetical protein TT1466 |Thermus thermophilus [TaxId: 274]
d3tbfc_ : (LYS288) (ILE328) [view usage] : c.80.1.1 |SIS domain |SIS domain |double-SIS domain |automated matches |Francisella tularensis [TaxId: 119856]
d3rota_ : (THR246) (ALA293) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
d3l51b_ : (ASN699) (LEU738) [view usage] : d.215.1.0 |Smc hinge domain |Smc hinge domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2gwfa_ : (THR184) (PRO222) [view usage] : c.46.1.4 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Ubiquitin carboxyl-terminal hydrolase 8, USP8 |Human (Homo sapiens) [TaxId: 9606]
d2krra2 : (ASP86) (SER124) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Nucleolin |Human (Homo sapiens) [TaxId: 9606]
d3ewib_ : (VAL39) (SER80) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.80, c.1, c.69, c.2, d.58, c.68, c.108, c.66, c.80, d.92, c.93, c.37, d.185, b.60, b.77, c.46, d.215, b.169