Tableau information
Concept source: d3k9va_ amino acid (a.a.) range (GLN82)(THR121)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN82) (LYS92) H1
(PHE97) (GLY102) E2
(SER106) (SER111) E3
(SER111) (THR121) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 139.1° E2
E3 -68.0° 151.0° E3
H4 98.7° -79.8° -109.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2pg6b_ : (MET54) (ALA95) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2v64h_ : (ASP58) (PHE141) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ejgg_ : (MET54) (GLN94) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1z10c_ : (GLN53) (ALA95) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1po5a_ : (LEU51) (ALA92) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Mammalian cytochrome p450 2b4 |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1f25a_ : (PHE22) (THR56) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d3bp8c_ : (GLN49) (ILE86) [view usage] : d.95.1.1 |Homing endonuclease-like |Glucose permease domain IIB |Glucose permease domain IIB |Glucose permease domain IIB |Escherichia coli [TaxId: 562]
d3k75d2 : (PRO151) (SER204) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase beta, catalytic (31 kD) fragment |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4ejhh_ : (GLN53) (GLN94) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bsea_ : (ASP8) (GLY34) [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
d1u1va2 : (ARG129) (ALA168) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Phenazine biosynthesis protein PhzF |Pseudomonas fluorescens [TaxId: 294]
d1xqda_ : (PHE22) (THR56) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d2pg7a_ : (MET54) (GLN94) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ng9a1 : (TYR446) (ALA485) [view usage] : a.113.1.1 |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |Escherichia coli [TaxId: 562]
d1lama2 : (ARG36) (ARG90) [view usage] : c.50.1.1 |Macro domain-like |Macro domain-like |Leucine aminopeptidase (Aminopeptidase A), N-terminal domain |Leucine aminopeptidase (Aminopeptidase A), N-terminal domain |Cow (Bos taurus) [TaxId: 9913]
d1f26a_ : (PHE22) (THR56) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1ph1b_ : (GLU45) (LYS74) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Core domain of telomere end binding protein beta subunit |Oxytricha nova [TaxId: 200597]
d1klqa_ : (LEU74) (PRO118) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |Human (Homo sapiens) [TaxId: 9606]
d2x80a_ : (PRO25) (ASP63) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1otcb_ : (GLU45) (PRO76) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Core domain of telomere end binding protein beta subunit |Oxytricha nova [TaxId: 200597]
d1z11b_ : (GLN53) (ALA95) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1jb7b_ : (GLU45) (LYS74) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Core domain of telomere end binding protein beta subunit |Oxytricha nova [TaxId: 200597]
d1ycla_ : (VAL4) (THR63) [view usage] : d.185.1.2 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |Autoinducer-2 production protein LuxS |Autoinducer-2 production protein LuxS |Bacillus subtilis [TaxId: 1423]
d1t6ka2 : (ARG129) (ALA168) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Phenazine biosynthesis protein PhzF |Pseudomonas fluorescens [TaxId: 294]
d1w2fa_ : (SER187) (ASP225) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A |Human (Homo sapiens) [TaxId: 9606]
d2pg7b_ : (GLN53) (ALA95) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2j1ma_ : (PRO25) (ASP63) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d2fdub_ : (MET54) (ALA95) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bnsa_ : (ASP8) (GLY34) [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Barnase |Bacillus amyloliquefaciens [TaxId: 1390]
d4ejgd_ : (MET54) (ALA95) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3l8cb_ : (GLU411) (PHE455) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301450]
d1cmna_ : (PHE22) (THR56) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1cmja_ : (PHE22) (THR56) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450-NOR, nitric reductase |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1iq0a3 : (PRO51) (ARG93) [view usage] : d.67.2.1 |RRF/tRNA synthetase additional domain-like |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |Thermus thermophilus [TaxId: 274]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.104, b.40, d.185, e.23, d.143, c.50, d.21, d.67, d.1, d.95, d.218, a.113, d.135