Tableau information
Concept source: d2gvka1 amino acid (a.a.) range (ASP289)(GLU316)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP289) (PHE294) H1
(PHE294) (THR299) E2
(THR301) (SER307) E3
(SER307) (GLU316) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -88.8° E2
E3 119.8° 63.8° E3
H4 -55.5° 36.2° 94.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4qava1 : (PRO217) (ARG251) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 662598]
d2khja_ : (GLU50) (GLU88) [view usage] : b.40.4.0 |OB-fold |Nucleic acid-binding proteins |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3veca_ : (ASP288) (LEU313) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d2aj2a1 : (LYS122) (LEU155) [view usage] : d.310.1.1 |VC0467-like |VC0467-like |VC0467-like |Hypothetical protein VC0467 |Vibrio cholerae [TaxId: 666]
d2gvka1 : (ASP289) (GLU316) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Hypothetical protein BT1219 |Bacteroides thetaiotaomicron [TaxId: 818]
d2haga1 : (ASP284) (GLN308) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Melanin biosynthesis protein TyrA |Shewanella oneidensis [TaxId: 70863]
d2hafa1 : (LYS124) (GLU159) [view usage] : d.310.1.1 |VC0467-like |VC0467-like |VC0467-like |Hypothetical protein VC0467 |Vibrio cholerae [TaxId: 666]
d4cisa1 : (LEU3) (LEU34) [view usage] : b.113.1.1 |N-terminal domain of MutM-like DNA repair proteins |N-terminal domain of MutM-like DNA repair proteins |N-terminal domain of MutM-like DNA repair proteins |automated matches |Lactococcus lactis [TaxId: 1359]
d1urdb_ : (ASN122) (PRO153) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Alicyclobacillus acidocaldarius [TaxId: 405212]
d1erka_ : (VAL302) (PHE352) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3vedb_ : (ASP288) (LEU313) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d3veeb_ : (ASP288) (LEU313) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d3vefa_ : (ASP288) (LEU313) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d3vefb_ : (ASP288) (LEU313) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d3vecb_ : (ASP288) (LEU313) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
d2iiza_ : (ASP284) (GLN308) [view usage] : d.58.4.14 |Ferredoxin-like |Dimeric alpha+beta barrel |Dyp-type peroxidase-like |Melanin biosynthesis protein TyrA |Shewanella oneidensis [TaxId: 70863]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, d.58, d.144, b.40, c.95, b.113, d.310