Protein Concepts Dictionary

Tableau information

Concept source:  d3wnya_  amino acid (a.a.) range (PRO2)(ALA54)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO2)    (PRO8) H1
	   (ILE18)   (TYR23) E2
	   (ALA29)   (VAL34) E3
	   (ALA48)   (ALA54) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
E2     -115.9°   E2                   
E3       61.1°  156.6°   E3            
H4     -129.4°  -29.7°  131.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4dtgk_ :     (PRO4)   (ILE56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1irha_ :     (PRO5)   (LYS60)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Tissue factor pathway inhibitor |Human (Homo sapiens) [TaxId: 9606]
 d1ld5a_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Collagen type VI (domain C5 from alpha 3 chain) |Human (Homo sapiens) [TaxId: 9606]
 d4tpii_ :     (PRO2)   (THR54)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Pancreatic trypsin inhibitor, BPTI |Cow (Bos taurus) [TaxId: 9913]
 d3wnya_ :     (PRO2)   (ALA54)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d3wnyb_ :     (PRO2)   (ALA57)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1bunb_ :     (HIS4)   (GLU56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |beta2-bungarotoxin, neurotoxin chain |Many-banded krait (Bungarus multicinctus) [TaxId: 8616]
 d1yc0i_ :   (GLN240)  (ALA299)   [view usage] : g.8.1.0 |BPTI-like |BPTI-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4islb_ :   (THR246)  (ALA299)   [view usage] : g.8.1.0 |BPTI-like |BPTI-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4isnb_ :   (THR246)  (CYS300)   [view usage] : g.8.1.0 |BPTI-like |BPTI-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1g6xa_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Pancreatic trypsin inhibitor, BPTI |Cow (Bos taurus) [TaxId: 9913]
 d1mbba1 :   (CYS113)  (GLN168)   [view usage] : d.145.1.2 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain |Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain |Escherichia coli [TaxId: 562]
 d2zjxb_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d2zvxb_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |automated matches |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.145,     g.8