Tableau information
Concept source: d3o6ta_ amino acid (a.a.) range (GLU70)(LEU108)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU70) (GLN76) H1
(PRO81) (LYS87) E2
(VAL92) (GLY97) E3
(LYS101) (LEU108) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 72.7° E2
E3 -103.2° 160.8° E3
H4 61.0° -32.4° 159.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2cbja3 : (PRO114) (LEU162) [view usage] : d.92.2.3 |Zincin-like |beta-N-acetylhexosaminidase-like domain |Hyaluronidase N-terminal domain-like |Hyaluronidase N-terminal domain |Clostridium perfringens [TaxId: 1502]
d1yqya1 : (ILE639) (ASP701) [view usage] : d.92.1.14 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Anthrax toxin lethal factor, N- and C-terminal domains |Anthrax toxin lethal factor, N- and C-terminal domains |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1nhoa_ : (ALA48) (GLU85) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |MTH807, thioredoxin/glutaredoxin-like protein |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2p5ra_ : (PRO114) (GLU168) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Populus trichocarpa [TaxId: 3695]
d1a3ab_ : (LYS71) (ASP123) [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Phosphotransferase IIa-mannitol |Escherichia coli [TaxId: 562]
d3gnja_ : (LYS63) (GLU107) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Desulfitobacterium hafniense [TaxId: 272564]
d1zmaa1 : (LEU70) (PHE112) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Bacterocin transport accessory protein Bta |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2kuca_ : (GLY72) (VAL117) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d1jzdb1 : (ILE167) (SER214) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Disulfide bond isomerase, DsbC, C-terminal domain |Escherichia coli [TaxId: 562]
d2m46a_ : (ASP88) (GLU114) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d1k6ma1 : (ASP211) (ASN245) [view usage] : c.37.1.7 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain |Human (Homo sapiens) [TaxId: 9606]
d1meka_ : (SER71) (THR116) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Human (Homo sapiens) [TaxId: 9606]
d1aaza_ : (ASP45) (TYR85) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Glutaredoxin (Grx, thioltransferase) |Bacteriophage T4 [TaxId: 10665]
d4npba2 : (ILE188) (GLN231) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |automated matches |Yersinia pestis [TaxId: 214092]
d1g0ta1 : (ILE167) (THR213) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Disulfide bond isomerase, DsbC, C-terminal domain |Escherichia coli [TaxId: 562]
d1g0tb1 : (ILE167) (GLY215) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Disulfide bond isomerase, DsbC, C-terminal domain |Escherichia coli [TaxId: 562]
d2a0ua1 : (PRO350) (GLN382) [view usage] : c.124.1.5 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |IF2B-like |Initiation factor 2b |Leishmania major [TaxId: 5664]
d1jm7b_ : (TRP34) (SER76) [view usage] : g.44.1.1 |RING/U-box |RING/U-box |RING finger domain, C3HC4 |bard1 RING domain |Human (Homo sapiens) [TaxId: 9606]
d1a3aa_ : (LYS71) (ASP123) [view usage] : d.112.1.1 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |IIA domain of mannitol-specific and ntr phosphotransferase EII |Phosphotransferase IIa-mannitol |Escherichia coli [TaxId: 562]
d3ul3a_ : (SER115) (HIS156) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d2aytb1 : (GLU72) (ARG119) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d2caia2 : (PRO42) (HIS83) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma haematobium) [TaxId: 6185]
d3dwva_ : (HIS116) (GLU165) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1oc9a_ : (ARG110) (LYS149) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin II |Crithidia fasciculata [TaxId: 5656]
d1c7sa4 : (GLN275) (VAL319) [view usage] : d.92.2.1 |Zincin-like |beta-N-acetylhexosaminidase-like domain |beta-N-acetylhexosaminidase domain |Bacterial chitobiase, Domain 2 |Serratia marcescens [TaxId: 615]
d1q89a_ : (GLU302) (PRO327) [view usage] : e.47.1.1 |39 kda initiator binding protein, IBP39, C-terminal domains |39 kda initiator binding protein, IBP39, C-terminal domains |39 kda initiator binding protein, IBP39, C-terminal domains |39 kda initiator binding protein, IBP39, C-terminal domains |Trichomonas vaginalis [TaxId: 5722]
d4jsha_ : (VAL499) (LEU542) [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1grxa_ : (THR44) (ASN82) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Glutaredoxin (Grx, thioltransferase) |Escherichia coli [TaxId: 562]
d3t2ua1 : (PRO39) (LYS73) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Wuchereria bancrofti [TaxId: 6293]
d1quwa_ : (PRO61) (GLN105) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Alicyclobacillus acidocaldarius, formerly Bacillus acidocaldarius [TaxId: 405212]
d2l2fa_ : (ASN3) (ALA59) [view usage] : b.89.1.0 |Cyanovirin-N |Cyanovirin-N |automated matches |automated matches |Fusarium graminearum (Gibberella zeae) [TaxId: 5518]
d1q9jb2 : (SER371) (THR412) [view usage] : c.43.1.2 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |NRPS condensation domain (amide synthase) |Polyketide synthase associated protein 5, PapA5 |Mycobacterium tuberculosis [TaxId: 1773]
d1eeja1 : (ILE167) (GLY215) [view usage] : c.47.1.9 |Thioredoxin fold |Thioredoxin-like |DsbC/DsbG C-terminal domain-like |Disulfide bond isomerase, DsbC, C-terminal domain |Escherichia coli [TaxId: 562]
d4kunb_ : (GLY49) (GLU88) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Legionella pneumophila [TaxId: 297246]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.92, c.124, c.37, c.47, d.174, c.43, d.112, g.44, b.89, e.47