Tableau information
Concept source: d2p9nd2 amino acid (a.a.) range (ASP171)(ASN233)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP171) (SER192) H1
(GLN197) (SER201) E2
(ILE220) (VAL226) E3
(PHE228) (ASN233) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -153.0° E2
E3 13.8° 161.3° E3
H4 97.4° -105.7° -83.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1jjac_ : (ASP138) (LYS172) [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Asparaginase type II |Escherichia coli [TaxId: 562]
d1ru3a_ : (GLN399) (LYS440) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Monomeric acetyl-CoA synthase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d3pnla_ : (ASP7) (ALA43) [view usage] : c.119.1.2 |DAK1/DegV-like |DAK1/DegV-like |DAK1 |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4cvqa_ : (ARG305) (ASN344) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d2e3zb_ : (GLY426) (GLU458) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
d3vija_ : (GLY455) (THR489) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Neotermes koshunensis [TaxId: 60586]
d1dmua_ : (TRP82) (ASN131) [view usage] : c.52.1.4 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BglI |Restriction endonuclease BglI |Bacillus subtilis [TaxId: 1423]
d1zm5a_ : (THR189) (GLY231) [view usage] : d.89.1.5 |Origin of replication-binding domain, RBD-like |Origin of replication-binding domain, RBD-like |Relaxase domain |automated matches |Escherichia coli [TaxId: 562]
d1egwb_ : (GLU14) (ASN73) [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |Myocyte enhancer factor Mef2a core |Human (Homo sapiens) [TaxId: 9606]
d1eyya_ : (THR324) (LYS370) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Vibrio harveyi [TaxId: 669]
d1tw2b1 : (PRO61) (ASP96) [view usage] : a.4.5.29 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Plant O-methyltransferase, N-terminal domain |Carminomycin 4-O-methyltransferase |Streptomyces peucetius [TaxId: 1950]
d2ldua_ : (MET68) (ASN116) [view usage] : a.4.5.22 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Heat-shock transcription factor |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2p9nd2 : (ASP171) (ASN233) [view usage] : d.198.2.1 |Secretion chaperone-like |Arp2/3 complex subunits |Arp2/3 complex subunits |ARPC2 (34 kDa subunit) |Cow (Bos taurus) [TaxId: 9913]
d1ylqb_ : (HIS0) (ARG47) [view usage] : d.218.1.5 |Nucleotidyltransferase |Nucleotidyltransferase |Catalytic subunit of bi-partite nucleotidyltransferase |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d4cvqb_ : (GLY304) (ASN344) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 83333]
d1fcba2 : (PRO13) (HIS43) [view usage] : d.120.1.1 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5 |Flavocytochrome b2, N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2e6na_ : (THR9) (GLY82) [view usage] : b.34.9.1 |SH3-like barrel |Tudor/PWWP/MBT |Tudor domain |P100 co-activator, SND1 |Human (Homo sapiens) [TaxId: 9606]
d2e3za_ : (GLY426) (GLU458) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
d1ylqa1 : (MET1) (ARG47) [view usage] : d.218.1.5 |Nucleotidyltransferase |Nucleotidyltransferase |Catalytic subunit of bi-partite nucleotidyltransferase |Putative nucleotidyltransferase AF0614 |Archaeoglobus fulgidus [TaxId: 2234]
d1egwa_ : (ASP13) (TYR72) [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |Myocyte enhancer factor Mef2a core |Human (Homo sapiens) [TaxId: 9606]
d3pnka_ : (VAL11) (ALA43) [view usage] : c.119.1.2 |DAK1/DegV-like |DAK1/DegV-like |DAK1 |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4ifkb_ : (SER17) (ASP59) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d4lrya_ : (LEU12) (ALA43) [view usage] : c.119.1.2 |DAK1/DegV-like |DAK1/DegV-like |DAK1 |automated matches |Escherichia coli K-12 [TaxId: 83333]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.82, c.52, b.34, a.4, e.26, c.88, d.89, d.218, d.120, c.119, d.198, d.88