Tableau information
Concept source: d1tiya_ amino acid (a.a.) range (HIS3)(GLY67)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS3) (GLY21) H1
(PHE26) (LYS32) E2
(ALA38) (ASN42) E3
(GLU55) (GLY67) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 140.8° E2
E3 -43.4° 165.9° E3
H4 113.3° -27.7° 153.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3teoa_ : (PRO147) (LYS195) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Acidianus sp. [TaxId: 1071056]
d1mnmb_ : (LYS29) (ASN95) [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |MCM1 transcriptional regulator |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1veua_ : (ASP4) (ARG46) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Mouse (Mus musculus) [TaxId: 10090]
d1hbxb_ : (ASN153) (LEU219) [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |Serum response factor (SRF) core |Human (Homo sapiens) [TaxId: 9606]
d4lw2a_ : (ASP207) (MET242) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2a2lb_ : (THR14) (LYS75) [view usage] : d.110.9.1 |Profilin-like |GlcG-like |GlcG-like |DhaI homolog |Klebsiella pneumoniae [TaxId: 573]
d1adna_ : (THR8) (ALA64) [view usage] : g.48.1.1 |Ada DNA repair protein, N-terminal domain (N-Ada 10) |Ada DNA repair protein, N-terminal domain (N-Ada 10) |Ada DNA repair protein, N-terminal domain (N-Ada 10) |Ada DNA repair protein, N-terminal domain (N-Ada 10) |Escherichia coli [TaxId: 562]
d1srsa_ : (LYS154) (ASN220) [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |Serum response factor (SRF) core |Human (Homo sapiens) [TaxId: 9606]
d2v9ga_ : (ASP191) (GLY245) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
d1y4oa1 : (ALA10) (TYR50) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |Dynein light chain 2A, cytoplasmic |Mouse (Mus musculus) [TaxId: 10090]
d2cvea1 : (SER29) (GLY82) [view usage] : d.14.1.11 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |YigZ N-terminal domain-like |Hypothetical protein TTHA1053, N-terminal domain |Thermus thermophilus [TaxId: 274]
d1r0va2 : (PHE216) (HIS257) [view usage] : c.52.2.1 |Restriction endonuclease-like |tRNA-intron endonuclease catalytic domain-like |tRNA-intron endonuclease catalytic domain-like |Dimeric tRNA splicing endonuclease, domains 2 and 4 |Archaeoglobus fulgidus [TaxId: 2234]
d1bvyb_ : (PRO25) (ASP63) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1veta_ : (ASP4) (ARG46) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Mouse (Mus musculus) [TaxId: 10090]
d1awia_ : (GLY2) (ILE42) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Human (Homo sapiens), isoform I [TaxId: 9606]
d3hmua_ : (PHE274) (GLY313) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 89184]
d3cpta_ : (ASP3) (ARG46) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Human (Homo sapiens) [TaxId: 9606]
d1wu7b1 : (GLU391) (GLN424) [view usage] : c.51.1.1 |Anticodon-binding domain-like |Class II aaRS ABD-related |Anticodon-binding domain of Class II aaRS |Histidyl-tRNA synthetase (HisRS), C-terminal domain |Thermoplasma acidophilum [TaxId: 2303]
d1k6ob_ : (ASN153) (ASN220) [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |Serum response factor (SRF) core |Human (Homo sapiens) [TaxId: 9606]
d2a2lc_ : (THR14) (LYS75) [view usage] : d.110.9.1 |Profilin-like |GlcG-like |GlcG-like |DhaI homolog |Klebsiella pneumoniae [TaxId: 573]
d2b3zd2 : (SER0) (GLY59) [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Riboflavin biosynthesis protein RibD |Bacillus subtilis [TaxId: 1423]
d2z3gd_ : (SER4) (ALA67) [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
d2z3hd_ : (SER4) (ALA67) [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
d4dw8a_ : (VAL92) (ASN132) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d1st0b1 : (GLN247) (CYS307) [view usage] : d.13.1.3 |HIT-like |HIT-like |mRNA decapping enzyme DcpS C-terminal domain |mRNA decapping enzyme DcpS C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1e7la2 : (LYS6) (ARG74) [view usage] : d.4.1.5 |His-Me finger endonucleases |His-Me finger endonucleases |Recombination endonuclease VII, N-terminal domain |Recombination endonuclease VII, N-terminal domain |Bacteriophage T4 [TaxId: 10665]
d3vvwb_ : (SER18) (MET77) [view usage] : d.15.1.0 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2d30a1 : (SER3) (LEU59) [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |mono-domain cytidine deaminase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1skoa_ : (GLY1) (ARG47) [view usage] : d.110.7.1 |Profilin-like |Roadblock/LC7 domain |Roadblock/LC7 domain |MEK binding partner 1, MP1 |Human (Homo sapiens) [TaxId: 9606]
d3c7ma_ : (TYR155) (LYS195) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2idaa1 : (CYS21) (ALA60) [view usage] : g.44.1.5 |RING/U-box |RING/U-box |Zf-UBP |Hypothetical protein RPA1320 |Rhodopseudomonas palustris [TaxId: 1076]
d1mnma_ : (ASN28) (ASN95) [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |MCM1 transcriptional regulator |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1pvta_ : (SER170) (GLY225) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |Putative sugar-phosphate aldolase |Thermotoga maritima [TaxId: 2336]
d3kfde_ : (LEU90) (ILE124) [view usage] : g.7.1.3 |Snake toxin-like |Snake toxin-like |Extracellular domain of cell surface receptors |TGF-beta type II receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
d1zcza2 : (SER336) (GLY388) [view usage] : c.97.1.4 |Cytidine deaminase-like |Cytidine deaminase-like |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC |Thermotoga maritima [TaxId: 2336]
d3l9ua_ : (TYR158) (LYS198) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d1vk9a_ : (ASN4) (ARG45) [view usage] : c.97.1.3 |Cytidine deaminase-like |Cytidine deaminase-like |Hypothetical protein TM1506 |Hypothetical protein TM1506 |Thermotoga maritima [TaxId: 2336]
d4bex1_ : (TYR68) (THR129) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t0za_ : (ASN19) (ASP65) [view usage] : g.3.7.1 |Knottins (small inhibitors, toxins, lectins) |Scorpion toxin-like |Long-chain scorpion toxins |Scorpion toxin |Scorpion (Buthus martensii), BmK IT-AP [TaxId: 34649]
d3j38b_ : (ASP111) (GLY181) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d2a2la1 : (LEU15) (CYS61) [view usage] : d.110.9.1 |Profilin-like |GlcG-like |GlcG-like |DhaI homolog |Klebsiella pneumoniae [TaxId: 573]
d1nj8a1 : (PRO341) (PHE393) [view usage] : c.51.1.1 |Anticodon-binding domain-like |Class II aaRS ABD-related |Anticodon-binding domain of Class II aaRS |Prolyl-tRNA synthetase (ProRS) domain |Methanocaldococcus jannaschii [TaxId: 2190]
d1a9ca_ : (VAL150) (VAL217) [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Escherichia coli [TaxId: 562]
d1v95a_ : (THR68) (GLU114) [view usage] : c.51.1.1 |Anticodon-binding domain-like |Class II aaRS ABD-related |Anticodon-binding domain of Class II aaRS |Nuclear receptor coactivator 5 (KIAA1637) |Human (Homo sapiens) [TaxId: 9606]
d1bvya_ : (PRO25) (CYS62) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1bifa1 : (ASP205) (ILE244) [view usage] : c.37.1.7 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4kypc_ : (HIS25) (ILE73) [view usage] : g.3.7.1 |Knottins (small inhibitors, toxins, lectins) |Scorpion toxin-like |Long-chain scorpion toxins |automated matches |Hottentotta judaicus [TaxId: 6863]
d1eaza_ : (GLN248) (ARG292) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Tapp1 |Human (Homo sapiens) [TaxId: 9606]
d3ugqa2 : (GLY422) (GLU458) [view usage] : c.51.1.0 |Anticodon-binding domain-like |Class II aaRS ABD-related |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3tena_ : (SER146) (LYS195) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Acidianus sp. [TaxId: 1071056]
d1t1ua1 : (SER291) (THR355) [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Choline O-acetyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3teoh_ : (SER146) (LYS195) [view usage] : c.53.2.0 |Resolvase-like |beta-carbonic anhydrase, cab |automated matches |automated matches |Acidianus sp. [TaxId: 1071056]
d1xn9a_ : (SER31) (LEU86) [view usage] : d.12.1.3 |Ribosomal proteins S24e, L23 and L15e |Ribosomal proteins S24e, L23 and L15e |Ribosomal protein S24e |Ribosomal protein S24e |Methanosarcina mazei [TaxId: 2209]
d1klva_ : (GLY18) (LEU63) [view usage] : d.15.1.3 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |GABARAP-like |GABA(A) receptor associated protein GABARAP |Human (Homo sapiens) [TaxId: 9606]
d3waob_ : (THR28) (GLN88) [view usage] : d.15.1.3 |beta-Grasp (ubiquitin-like) |Ubiquitin-like |GABARAP-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2b3za2 : (MET1) (GLY59) [view usage] : c.97.1.2 |Cytidine deaminase-like |Cytidine deaminase-like |Deoxycytidylate deaminase-like |Riboflavin biosynthesis protein RibD |Bacillus subtilis [TaxId: 1423]
d1wm9e_ : (GLN149) (ARG216) [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Thermus thermophilus [TaxId: 274]
d2fug21 : (LEU125) (GLY160) [view usage] : c.47.1.21 |Thioredoxin fold |Thioredoxin-like |NQO2-like |NADH-quinone oxidoreductase chain 2, NQO2 |Thermus thermophilus [TaxId: 274]
d1k6oc_ : (ASN153) (ASN220) [view usage] : d.88.1.1 |SRF-like |SRF-like |SRF-like |Serum response factor (SRF) core |Human (Homo sapiens) [TaxId: 9606]
d3u5cb_ : (ASP108) (GLY178) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, a.104, i.1, c.108, c.74, c.37, c.47, d.14, d.96, c.97, d.110, c.53, c.43, c.51, b.55, c.52, d.109, d.15, d.13, d.4,
g.7, d.12, g.44, d.88, g.3, g.48