Tableau information
Concept source: d1bsoa_ amino acid (a.a.) range (ASP11)(ASP33)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP11) (ALA16) H1
(GLY17) (LEU22) E2
(LEU22) (SER27) E3
(ASP28) (ASP33) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 74.4° E2
E3 -123.6° -63.3° E3
H4 -39.0° -113.3° 148.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1bsoa_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
d1beba_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
d1yupf_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Reindeer (Rangifer tarandus) [TaxId: 9870]
d4nlia_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d4oryb_ : (GLN35) (LEU62) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1yupb_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Reindeer (Rangifer tarandus) [TaxId: 9870]
d3qkga_ : (ASN17) (ILE40) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c82a3 : (ALA762) (GLU814) [view usage] : b.30.5.2 |Supersandwich |Galactose mutarotase-like |Hyaluronate lyase-like, central domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2owsa_ : (THR211) (LEU261) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Bordetella pertussis [TaxId: 257313]
d1l5ja3 : (SER383) (ALA429) [view usage] : c.83.1.1 |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase B, C-terminal domain |Escherichia coli [TaxId: 562]
d1b8ea_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
d1w8xg_ : (ASP320) (GLY359) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PRD1 capsid assembly |Bacteriophage PRD1 [TaxId: 10658]
d4lzua_ : (ASP11) (ARG40) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
d4ck4a_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Sheep (Ovis aries) [TaxId: 9940]
d1yuph_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Reindeer (Rangifer tarandus) [TaxId: 9870]
d3o2ya_ : (GLN35) (LEU62) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4es7a_ : (ASN10) (ILE33) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1yupa1 : (ASP11) (ARG40) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Reindeer (Rangifer tarandus) [TaxId: 9870]
d4nn0b_ : (VAL211) (PHE242) [view usage] : b.22.1.0 |TNF-like |TNF-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2q2ma_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
d1i06a_ : (ASN29) (ARG57) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Major urinary protein/alpha-2u-globulin |Mouse (Mus musculus) [TaxId: 10090]
d1uz2x_ : (ASP11) (ASP33) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |beta-Lactoglobulin |Cow (Bos taurus) [TaxId: 9913]
d2fywb_ : (GLN167) (TYR189) [view usage] : c.135.1.1 |NIF3 (NGG1p interacting factor 3)-like |NIF3 (NGG1p interacting factor 3)-like |NIF3 (NGG1p interacting factor 3)-like |Hypothetical protein SP1609 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, b.30, c.135, i.6, b.60, b.22, c.83