Tableau information
Concept source: d2pukc_ amino acid (a.a.) range (PRO69)(TYR111)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO69) (ASN76) H1
(THR82) (LYS87) E2
(LYS92) (GLY97) E3
(LYS101) (TYR111) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 76.2° E2
E3 -109.8° 161.1° E3
H4 73.3° -17.2° -176.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1f2oa_ : (PRO146) (ASN190) [view usage] : c.56.5.4 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Bacterial dinuclear zinc exopeptidases |Aminopeptidase |Streptomyces griseus [TaxId: 1911]
d3wgdc_ : (SER125) (GLU170) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3fr6a1 : (ASP40) (TYR83) [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1etha2 : (SER31) (SER63) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d2b7kb_ : (THR208) (TYR276) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin-like protein Sco1 (YpmQ), soluble domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3r42a_ : (TYR91) (HIS153) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1thoa_ : (GLY65) (LEU107) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
d1bq7a_ : (LYS140) (SER186) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |Disulfide-bond formation facilitator (DsbA) |Escherichia coli [TaxId: 562]
d3wgdh_ : (SER125) (GLU170) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qe0a1 : (ASP388) (LYS420) [view usage] : c.51.1.1 |Anticodon-binding domain-like |Class II aaRS ABD-related |Anticodon-binding domain of Class II aaRS |Histidyl-tRNA synthetase (HisRS), C-terminal domain |Staphylococcus aureus [TaxId: 1280]
d3ksga_ : (ASP92) (LEU153) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 282458]
d1qe0b1 : (ASP388) (LYS419) [view usage] : c.51.1.1 |Anticodon-binding domain-like |Class II aaRS ABD-related |Anticodon-binding domain of Class II aaRS |Histidyl-tRNA synthetase (HisRS), C-terminal domain |Staphylococcus aureus [TaxId: 1280]
d2abja_ : (SER84) (THR126) [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4oeua_ : (LEU434) (TRP492) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d1gpla2 : (ASP30) (SER62) [view usage] : c.69.1.19 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Pancreatic lipase, N-terminal domain |Pancreatic lipase, N-terminal domain |Guinea pig (Cavia porcellus) [TaxId: 10141]
d1pa3a2 : (ALA41) (TYR83) [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Pf GST |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d2dxla1 : (CYS95) (GLY147) [view usage] : d.159.1.11 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |GpdQ-like |Glycerophosphodiesterase GpdQ |Enterobacter aerogenes [TaxId: 548]
d1okta2 : (ASP40) (TYR83) [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Pf GST |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d3l9vc_ : (ARG137) (ALA184) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d2zo9b1 : (CYS95) (GLY147) [view usage] : d.159.1.11 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |GpdQ-like |Glycerophosphodiesterase GpdQ |Enterobacter aerogenes [TaxId: 548]
d3wgda_ : (SER125) (GLU170) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nj1a1 : (PRO358) (GLU410) [view usage] : c.51.1.1 |Anticodon-binding domain-like |Class II aaRS ABD-related |Anticodon-binding domain of Class II aaRS |Prolyl-tRNA synthetase (ProRS) domain |Methanothermobacter thermautotrophicus [TaxId: 145262]
d1qpva_ : (GLU11) (LYS56) [view usage] : d.109.1.2 |Gelsolin-like |Actin depolymerizing proteins |Cofilin-like |Cofilin (actin depolymerizing factor, ADF) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1h4oa_ : (VAL117) (LEU161) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peroxiredoxin 5 |Human (Homo sapiens) [TaxId: 9606]
d3diea_ : (SER62) (LEU104) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Staphylococcus aureus [TaxId: 1280]
d3d03a_ : (CYS95) (GLY147) [view usage] : d.159.1.11 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |GpdQ-like |Glycerophosphodiesterase GpdQ |Enterobacter aerogenes [TaxId: 548]
d1chma2 : (GLY225) (ILE292) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase, catalytic (C-terminal) domain |Pseudomonas putida [TaxId: 303]
d1dbya_ : (PRO63) (LEU106) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
d1pv9a2 : (GLY185) (ALA251) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Aminopeptidase P, C-terminal domain |Pyrococcus furiosus [TaxId: 2261]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, c.94, d.159, c.56, c.47, d.127, e.17, d.20, d.110, c.51, d.109