Tableau information
Concept source: d2i9fa1 amino acid (a.a.) range (GLN60)(VAL104)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN60) (ILE76) H1
(GLY79) (ALA83) E2
(GLY87) (SER93) E3
(LYS98) (VAL104) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -69.7° E2
E3 109.3° 164.9° E3
H4 -111.9° 71.4° -95.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2i9fd_ : (GLN60) (VAL104) [view usage] : d.254.1.1 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Arterivirus nucleocapsid protein |Arterivirus nucleocapsid protein |Equine arteritis virus [TaxId: 11047]
d2i9fa1 : (GLN60) (VAL104) [view usage] : d.254.1.1 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Arterivirus nucleocapsid protein |Arterivirus nucleocapsid protein |Equine arteritis virus [TaxId: 11047]
d3e5xa2 : (ASN148) (ILE186) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Chlorophenol reduction protein CprK |Desulfitobacterium hafniense [TaxId: 49338]
d1n88a_ : (THR35) (ILE96) [view usage] : d.12.1.1 |Ribosomal proteins S24e, L23 and L15e |Ribosomal proteins S24e, L23 and L15e |L23p |Ribosomal protein L23 |Thermus thermophilus [TaxId: 274]
d2i9fc_ : (GLN60) (VAL104) [view usage] : d.254.1.1 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Arterivirus nucleocapsid protein |Arterivirus nucleocapsid protein |Equine arteritis virus [TaxId: 11047]
d1oroa_ : (PRO3) (GLY61) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Orotate PRTase |Escherichia coli [TaxId: 562]
d2i9fb_ : (GLN61) (VAL104) [view usage] : d.254.1.1 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Arterivirus nucleocapsid protein |Arterivirus nucleocapsid protein |Equine arteritis virus [TaxId: 11047]
d3soka_ : (GLU35) (ALA91) [view usage] : d.24.1.0 |Pili subunits |Pili subunits |automated matches |automated matches |Dichelobacter nodosus [TaxId: 870]
d1p65a_ : (THR17) (THR67) [view usage] : d.254.1.1 |Nucleocapsid protein dimerization domain |Nucleocapsid protein dimerization domain |Arterivirus nucleocapsid protein |Arterivirus nucleocapsid protein |PRRSV (Porcine reproductive and respiratory syndrome virus) [TaxId: 28344]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.61, a.4, d.254, d.24, d.12