Tableau information
Concept source: d3vd0k_ amino acid (a.a.) range (CYS262)(GLU311)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(CYS262) (MET266) H1
(PRO270) (THR276) E2
(LEU285) (CYS295) E3
(CYS297) (GLU311) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 63.1° E2
E3 -146.3° 150.4° E3
H4 -50.0° -100.8° 105.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3d0ab_ : (CYS242) (LYS291) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |p53 tumor suppressor, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d3vd0d_ : (CYS262) (GLN312) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3vd0a_ : (CYS262) (GLU311) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2o3bb_ : (THR4) (THR50) [view usage] : d.221.1.1 |Nuclease A inhibitor (NuiA) |Nuclease A inhibitor (NuiA) |Nuclease A inhibitor (NuiA) |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]
d1wd3a2 : (SER381) (ALA436) [view usage] : b.42.8.1 |beta-Trefoil |AbfB domain |AbfB domain |Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain |Aspergillus kawachii [TaxId: 40384]
d4nw5a1 : (ASP64) (VAL109) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1m3ja_ : (TRP428) (ILE452) [view usage] : f.9.1.1 |Perfringolysin |Perfringolysin |Perfringolysin |Perfringolysin |Clostridium perfringens [TaxId: 1502]
d2hgla_ : (ASP65) (GLY101) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3vd0i_ : (CYS262) (ARG310) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2v8ca_ : (ASP54) (CYS83) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4guob_ : (CYS262) (TYR309) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1sb7a_ : (ASN23) (PHE65) [view usage] : d.265.1.4 |Pseudouridine synthase |Pseudouridine synthase |tRNA pseudouridine synthase TruD |tRNA pseudouridine synthase TruD |Escherichia coli [TaxId: 562]
d4nfza_ : (GLU83) (LYS139) [view usage] : c.52.1.34 |Restriction endonuclease-like |Restriction endonuclease-like |PA N-terminal domain |PA N-terminal domain |Influenza A virus [TaxId: 93838]
d3pnra_ : (LEU84) (GLY144) [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |Falcipain 2 |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d4a63a_ : (CYS262) (ASN314) [view usage] : b.2.5.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |p53-like transcription factors |p53 DNA-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58, d.144, d.3, b.2, d.110, b.42, c.52, d.265, f.9, d.221