Tableau information
Concept source: d1aq0a_ amino acid (a.a.) range (MET184)(HIS221)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET184) (PHE189) H1
(VAL195) (GLY199) E2
(ALA200) (GLN204) E3
(LEU206) (HIS221) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -76.5° E2
E3 92.9° 163.3° E3
H4 -75.8° 31.9° -133.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1u5da1 : (ASP171) (SER213) [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Src kinase-associated phosphoprotein SKAP55 (SCAP1) |Human (Homo sapiens) [TaxId: 9606]
d2d2zb1 : (ALA70) (CYS100) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3b1ua3 : (TRP347) (MET385) [view usage] : d.126.1.5 |Pentein, beta/alpha-propeller |Pentein |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Peptidylarginine deiminase Pad4, catalytic C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2d2zc1 : (ALA70) (CYS100) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ee8a3 : (HIS228) (GLY263) [view usage] : g.39.1.8 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |C-terminal, Zn-finger domain of MutM-like DNA repair proteins |DNA repair protein MutM (Fpg) |Thermus thermophilus [TaxId: 274]
d1zn7a_ : (ASP3) (ASP35) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Human (Homo sapiens) [TaxId: 9606]
d1c4za_ : (GLY545) (ASN603) [view usage] : d.148.1.1 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |Ubiquitin-protein ligase E3a (E6ap) |Human (Homo sapiens) [TaxId: 9606]
d2yivx_ : (CYS39) (GLY110) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Ni-containing carbon monoxide dehydrogenase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d1nyqa3 : (SER188) (ARG241) [view usage] : d.67.1.1 |RRF/tRNA synthetase additional domain-like |ThrRS/AlaRS common domain |Threonyl-tRNA synthetase (ThrRS), second 'additional' domain |Threonyl-tRNA synthetase (ThrRS), second 'additional' domain |Staphylococcus aureus [TaxId: 1280]
d1g61a_ : (SER2195) (ALA2224) [view usage] : d.126.1.1 |Pentein, beta/alpha-propeller |Pentein |Ribosome anti-association factor eIF6 (aIF6) |Ribosome anti-association factor eIF6 (aIF6) |Methanococcus jannaschii [TaxId: 2190]
d1vw4c_ : (SER94) (LYS121) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Saccharomyces cerevisiae [TaxId: 4932]
d3vlna1 : (ASN67) (GLU95) [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ld4a_ : (HIS1148) (GLU1176) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Structural proteins |Sindbis virus [TaxId: 11034]
d1zvda_ : (TYR434) (GLY497) [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1r4ka_ : (LEU395) (ASN420) [view usage] : b.34.14.1 |SH3-like barrel |PAZ domain |PAZ domain |Argonaute 1 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2yw8a_ : (CYS46) (LEU73) [view usage] : g.50.1.0 |FYVE/PHD zinc finger |FYVE/PHD zinc finger |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1g2qa_ : (MET1) (ASN36) [view usage] : c.61.1.1 |PRTase-like |PRTase-like |Phosphoribosyltransferases (PRTases) |Adenine PRTase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1su6a_ : (CYS39) (GLY110) [view usage] : e.26.1.2 |Prismane protein-like |Prismane protein-like |Carbon monoxide dehydrogenase |Ni-containing carbon monoxide dehydrogenase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d2fkbc_ : (ARG4) (ALA32) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1yuia_ : (ARG25) (HIS57) [view usage] : g.37.1.1 |beta-beta-alpha zinc fingers |beta-beta-alpha zinc fingers |Classic zinc finger, C2H2 |GAGA factor |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1dxrl_ : (GLY18) (GLY56) [view usage] : f.26.1.1 |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |L (light) subunit |Rhodopseudomonas viridis [TaxId: 1079]
d3fzia_ : (GLU89) (ASP135) [view usage] : d.151.1.0 |DNase I-like |DNase I-like |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d1hywa_ : (GLN4) (THR54) [view usage] : d.186.1.1 |gpW/XkdW-like |Head-to-tail joining protein W, gpW |Head-to-tail joining protein W, gpW |Head-to-tail joining protein W, gpW |Bacteriophage lambda [TaxId: 10710]
d3d0ga_ : (SER109) (LEU148) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme 2, ACE2 |Paguma larvata
d4dejd1 : (TYR56) (PRO85) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Idiomarina loihiensis [TaxId: 283942]
d2r5ga1 : (ALA65) (ALA95) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1aw9a2 : (ASN50) (LYS78) [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Class phi GST |Maize (Zea mays), type III [TaxId: 4577]
d1h7ba_ : (LEU84) (HIS122) [view usage] : c.7.1.3 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |Class III anaerobic ribonucleotide reductase NRDD subunit |Class III anaerobic ribonucleotide reductase NRDD subunit |Bacteriophage T4 [TaxId: 10665]
d1aq0a_ : (MET184) (HIS221) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Plant beta-glucanases |Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
d1prcl_ : (GLY18) (GLY56) [view usage] : f.26.1.1 |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |Bacterial photosystem II reaction centre, L and M subunits |L (light) subunit |Rhodopseudomonas viridis [TaxId: 1079]
d1k46a_ : (THR69) (SER125) [view usage] : d.195.1.1 |YopH tyrosine phosphatase N-terminal domain |YopH tyrosine phosphatase N-terminal domain |YopH tyrosine phosphatase N-terminal domain |YopH tyrosine phosphatase N-terminal domain |Yersinia pseudotuberculosis [TaxId: 633]
d4uonb_ : (HIS151) (ALA180) [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Aura virus [TaxId: 44158]
d4deje1 : (TYR56) (PRO85) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Idiomarina loihiensis [TaxId: 283942]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, i.1, b.47, d.92, i.6, c.7, c.47, d.151, f.26, d.126, c.61, b.55, b.34, d.67, e.26, d.148, d.113, g.39, g.37, g.50,
d.186, d.195