Tableau information
Concept source: d1y5hb3 amino acid (a.a.) range (SER86)(LEU123)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER86) (GLN98) H1
(ARG100) (SER106) E2
(GLY112) (GLU116) E3
(GLU116) (LEU123) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 128.8° E2
E3 -73.4° 148.9° E3
H4 -144.0° 86.6° -71.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3rkka_ : (ASP225) (ARG270) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1g0u2_ : (SER147) (LEU187) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome beta subunit (catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1nrza_ : (PRO125) (GLU160) [view usage] : c.38.1.1 |PTS IIb component |PTS IIb component |PTS IIb component |Sorbose permease subunit IIb , EIIb-sor |Klebsiella pneumoniae [TaxId: 573]
d3k2vb_ : (LEU295) (ARG330) [view usage] : d.37.1.0 |CBS-domain pair |CBS-domain pair |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
d3oz7b_ : (HIS124) (LEU156) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d3qmlb2 : (ALA318) (ASN351) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1z1ga2 : (LYS220) (GLY267) [view usage] : d.163.1.1 |DNA breaking-rejoining enzymes |DNA breaking-rejoining enzymes |Lambda integrase-like, catalytic core |Integrase (Int) |Bacteriophage lambda [TaxId: 10710]
d3k2va_ : (ALA296) (ARG330) [view usage] : d.37.1.0 |CBS-domain pair |CBS-domain pair |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 272620]
d1i19a2 : (GLN98) (ASN147) [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |Cholesterol oxidase |Brevibacterium sterolicum [TaxId: 1702]
d1f4ca_ : (TYR94) (LYS120) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
d1ohca1 : (THR147) (GLN191) [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Proline directed phosphatase CDC14b2 |Human (Homo sapiens) [TaxId: 9606]
d1qpga_ : (HIS123) (SER153) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1vq0a2 : (LYS248) (ASP286) [view usage] : g.81.1.1 |HSP33 redox switch-like |HSP33 redox switch-like |HSP33 redox switch-like |HSP33, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2g8xa_ : (VAL93) (LYS120) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
d2e9fd_ : (SER109) (ALA174) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3wxrg_ : (SER187) (ASN247) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1vzya2 : (LYS252) (GLN288) [view usage] : g.81.1.1 |HSP33 redox switch-like |HSP33 redox switch-like |HSP33 redox switch-like |HSP33, C-terminal domain |Bacillus subtilis [TaxId: 1423]
d1blea_ : (THR124) (THR162) [view usage] : c.38.1.1 |PTS IIb component |PTS IIb component |PTS IIb component |Fructose permease, subunit IIb |Bacillus subtilis [TaxId: 1423]
d1qoya_ : (GLY180) (GLY201) [view usage] : h.4.4.1 |Antiparallel coiled-coil |Bacterial hemolysins |Hemolysin E (HlyE, ClyA, SheA) |Hemolysin E (HlyE, ClyA, SheA) |Escherichia coli [TaxId: 562]
d1tygg_ : (ILE18) (GLU48) [view usage] : d.15.3.2 |beta-Grasp (ubiquitin-like) |MoaD/ThiS |ThiS |Thiamin biosynthesis sulfur carrier protein ThiS |Bacillus subtilis [TaxId: 1423]
d1pbja3 : (THR83) (MSE121) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Hypothetical protein MTH1622 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d3fhma_ : (SER24) (GLY64) [view usage] : d.37.1.0 |CBS-domain pair |CBS-domain pair |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d3spue_ : (ASP225) (ASP267) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2yzib_ : (LEU92) (ARG130) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d4h0rb_ : (VAL96) (ARG123) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Corynebacterium glutamicum [TaxId: 196627]
d1moma_ : (SER191) (ASN236) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Momorcharin (momordin) |Bitter gourd (Momordica charantia) [TaxId: 3673]
d2qr1g1 : (VAL43) (SER88) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |automated matches |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d2fhh2_ : (ASP459) (SER522) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3pg4a_ : (ASP225) (HIS274) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2e9fb_ : (SER109) (ASN194) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3spub_ : (ASP225) (ASP267) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d3ddja1 : (VAL227) (LYS276) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Uncharacterized protein SSO3205 |Sulfolobus solfataricus [TaxId: 2287]
d3k6ea_ : (THR101) (HIS142) [view usage] : d.37.1.0 |CBS-domain pair |CBS-domain pair |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2rc3a1 : (VAL46) (LYS81) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Uncharacterized protein NE2398 |Nitrosomonas europaea [TaxId: 915]
d2oaua1 : (GLY113) (GLY173) [view usage] : b.38.1.3 |Sm-like fold |Sm-like ribonucleoproteins |Mechanosensitive channel protein MscS (YggB), middle domain |Mechanosensitive channel protein MscS (YggB), middle domain |Escherichia coli [TaxId: 562]
d1zfja4 : (LEU173) (PRO213) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Type II inosine monophosphate dehydrogenase CBS domains |Streptococcus pyogenes [TaxId: 1314]
d1y5ha3 : (SER86) (HIS122) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Hypothetical protein Rv2626c |Mycobacterium tuberculosis [TaxId: 1773]
d3di1b_ : (ILE248) (LYS290) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d1eyua_ : (ASN87) (SER133) [view usage] : c.52.1.6 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease PvuII |Restriction endonuclease PvuII |Proteus vulgaris [TaxId: 585]
d2i0ka2 : (GLN98) (ASN147) [view usage] : d.145.1.0 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |automated matches |automated matches |Brevibacterium sterolicum [TaxId: 1702]
d1hh8a_ : (TYR87) (GLU135) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Neutrophil cytosolic factor 2 (NCF-2, p67-phox) |Human (Homo sapiens) [TaxId: 9606]
d1zata2 : (GLN219) (LEU251) [view usage] : d.335.1.1 |L,D-transpeptidase pre-catalytic domain-like |L,D-transpeptidase pre-catalytic domain-like |L,D-transpeptidase pre-catalytic domain-like |L,D-transpeptidase, pre-catalytic domain |Enterococcus faecium [TaxId: 1352]
d2jr7a_ : (THR35) (SER66) [view usage] : g.41.17.1 |Rubredoxin-like |CSL zinc finger |CSL zinc finger |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3l0ja_ : (GLN346) (HIS411) [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wz7b_ : (ILE54) (GLN98) [view usage] : d.330.1.1 |ERH-like |ERH-like |ERH-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2ef7a1 : (THR87) (PHE127) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Uncharacterized protein ST2348 |Sulfolobus tokodaii [TaxId: 111955]
d3rkja_ : (TYR229) (ARG270) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1vzyb2 : (LYS251) (GLY284) [view usage] : g.81.1.1 |HSP33 redox switch-like |HSP33 redox switch-like |HSP33 redox switch-like |HSP33, C-terminal domain |Bacillus subtilis [TaxId: 1423]
d2rc3c_ : (SER45) (LYS81) [view usage] : d.37.1.1 |CBS-domain pair |CBS-domain pair |CBS-domain pair |Uncharacterized protein NE2398 |Nitrosomonas europaea [TaxId: 915]
d1kf0a_ : (HIS124) (LYS155) [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Pig (Sus scrofa) [TaxId: 9823]
d1f4cb_ : (TYR94) (ASP122) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
d2l6qa_ : (ARG3) (THR54) [view usage] : d.186.1.1 |gpW/XkdW-like |Head-to-tail joining protein W, gpW |Head-to-tail joining protein W, gpW |Head-to-tail joining protein W, gpW |Bacteriophage lambda [TaxId: 10710]
d1ni0a_ : (PRO88) (GLU121) [view usage] : c.52.1.6 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease PvuII |Restriction endonuclease PvuII |Proteus vulgaris [TaxId: 585]
d3wxrv_ : (SER147) (LEU196) [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.118, d.157, d.117, c.45, d.165, a.127, c.55, c.86, d.153, a.123, d.37, c.52, d.145, c.38, b.38, d.15, h.4, g.41, d.163,
d.186, g.81, d.335, d.330