Tableau information
Concept source: d2v9xl_ amino acid (a.a.) range (PRO24)(MET69)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO24) (ASN29) H1
(ALA31) (LEU37) E2
(PHE41) (HIS47) E3
(ALA64) (MET69) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 120.9° E2
E3 60.9° -60.9° E3
H4 118.3° -61.2° 97.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4e1ja1 : (GLU224) (GLN274) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3g25c1 : (ASP200) (GLN252) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d1jqmb_ : (ALA656) (GLY690) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |70S ribosome functional complex |Escherichia coli [TaxId: 562]
d4e1jc1 : (ASP223) (GLN274) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d2v9xl_ : (PRO24) (MET69) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
d1g5ua_ : (SER1002) (GLU1056) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Rubber tree (Hevea brasiliensis), hevb8 [TaxId: 3981]
d2gs5a1 : (ASP121) (GLY153) [view usage] : d.310.1.1 |VC0467-like |VC0467-like |VC0467-like |Hypothetical protein DIP2367 |Corynebacterium diphtheriae [TaxId: 1717]
d1xs6a_ : (PRO24) (VAL68) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
d1yfna_ : (ARG10) (ARG47) [view usage] : b.136.1.1 |SspB-like |SspB-like |Stringent starvation protein B, SspB |automated matches |Escherichia coli [TaxId: 562]
d3flco1 : (GLN202) (GLN254) [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
d1ddta2 : (GLY1) (GLY34) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Diphtheria toxin, N-terminal domain |Corynebacterium diphtheriae [TaxId: 1717]
d2j4qb_ : (PRO24) (MET69) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
d1ekma2 : (SER29) (LYS68) [view usage] : d.17.2.1 |Cystatin-like |Amine oxidase N-terminal region |Amine oxidase N-terminal region |Copper amine oxidase, domains 1 and 2 |Yeast (Hansenula polymorpha) [TaxId: 4905]
d4f1va_ : (LYS1077) (GLY1119) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Phosphate-binding protein |Pseudomonas fluorescens [TaxId: 216595]
d3g25a1 : (ASP200) (GLN252) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d2cu2a2 : (SER171) (ARG203) [view usage] : c.68.1.20 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |mannose-1-phosphate guanylyl transferase |Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 |Thermus thermophilus [TaxId: 274]
d1sb9a_ : (LEU82) (ASP110) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |UDP-N-acetylglucosamine 4-epimerase WbpP |Pseudomonas aeruginosa [TaxId: 287]
d1a2va2 : (SER29) (GLY71) [view usage] : d.17.2.1 |Cystatin-like |Amine oxidase N-terminal region |Amine oxidase N-terminal region |Copper amine oxidase, domains 1 and 2 |Yeast (Hansenula polymorpha) [TaxId: 4905]
d3d7eo1 : (GLN202) (GLN254) [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
d2wqta_ : (PRO95) (ILE130) [view usage] : d.177.1.1 |FAH |FAH |FAH |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4u3wb_ : (ALA374) (ALA393) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d2cmza1 : (VAL173) (LYS200) [view usage] : e.76.1.2 |Viral glycoprotein ectodomain-like |Viral glycoprotein ectodomain-like |Spike glycoprotein-like |Spike glycoprotein |Vesicular stomatitis indiana virus [TaxId: 11277]
d1t5oa_ : (ARG286) (THR318) [view usage] : c.124.1.5 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |IF2B-like |Putative eIF-2B delta-subunit |Archaeoglobus fulgidus [TaxId: 2234]
d2v9xa_ : (PRO24) (VAL68) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
d1gzea_ : (SER181) (ALA208) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Exoenzyme c3 |Clostridium botulinum [TaxId: 1491]
d3h3no1 : (GLN202) (GLN254) [view usage] : c.55.1.4 |Ribonuclease H-like motif |Actin-like ATPase domain |Glycerol kinase |Glycerol kinase |Enterococcus casseliflavus [TaxId: 37734]
d1mzpa_ : (GLU6) (ALA79) [view usage] : e.24.1.1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Ribosomal protein L1 |Sulfolobus acidocaldarius [TaxId: 2285]
d2j4hb_ : (PRO24) (VAL68) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
d3i9v33 : (CYS291) (LEU333) [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2j4qa_ : (PRO24) (VAL68) [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
d4ezml_ : (PRO204) (SER252) [view usage] : d.169.1.1 |C-type lectin-like |C-type lectin-like |C-type lectin domain |Low affinity immunoglobulin epsilon Fc receptor |Human (Homo sapiens) [TaxId: 9606]
d1sv6a_ : (PRO95) (ILE130) [view usage] : d.177.1.1 |FAH |FAH |FAH |2-keto-4-pentenoate hydratase MhpD |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.81, c.94, c.2, i.1, c.68, c.82, c.124, c.55, d.166, d.169, b.85, d.110, d.17, d.177, b.136, e.24, e.76, d.310