Protein Concepts Dictionary

Tableau information

Concept source:  d1aala_  amino acid (a.a.) range (PRO2)(GLY56)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO2)    (GLU7) H1
	   (ARG20)   (TYR23) E2
	   (GLN31)   (GLY36) E3
	   (ALA48)   (GLY56) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
E2     -108.6°   E2                   
E3       81.5°  153.6°   E3            
H4     -119.1°  -38.3°  115.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d7ptia_ :     (PRO2)   (THR54)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Pancreatic trypsin inhibitor, BPTI |Cow (Bos taurus) [TaxId: 9913]
 d1bpia_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Pancreatic trypsin inhibitor, BPTI |Cow (Bos taurus) [TaxId: 9913]
 d3vc3a_ :    (HIS57)   (ALA92)   [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Soybean (Glycine max) [TaxId: 3847]
 d1iuea_ :    (ASP65)   (ASP97)   [view usage] : d.15.4.1 |beta-Grasp (ubiquitin-like) |2Fe-2S ferredoxin-like |2Fe-2S ferredoxin-related |2Fe-2S ferredoxin |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d2kaii_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Pancreatic trypsin inhibitor, BPTI |Cow (Bos taurus) [TaxId: 9913]
 d1aala_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Pancreatic trypsin inhibitor, BPTI |Cow (Bos taurus) [TaxId: 9913]
 d2q3da_ :     (ASP6)   (ASN41)   [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3vc3f_ :    (HIS57)   (ALA92)   [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Soybean (Glycine max) [TaxId: 3847]
 d1btia_ :     (PRO2)   (GLY56)   [view usage] : g.8.1.1 |BPTI-like |BPTI-like |Small Kunitz-type inhibitors & BPTI-like toxins |Pancreatic trypsin inhibitor, BPTI |Cow (Bos taurus) [TaxId: 9913]
 d4tlga2 :    (PRO77)  (SER114)   [view usage] : c.13.1.0 |SpoIIaa-like |CRAL/TRIO domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.79,    c.13,    d.15,     g.8