Tableau information
Concept source: d1qynb_ amino acid (a.a.) range (LEU106)(LEU141)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU106) (THR122) H1
(PRO124) (LEU128) E2
(ALA129) (PHE133) E3
(PHE133) (LEU141) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 170.6° E2
E3 151.8° -21.7° E3
H4 111.2° -59.3° -47.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ozbe_ : (GLN110) (GLN154) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Haemophilus influenzae [TaxId: 727]
d1lbva_ : (LYS43) (GLY93) [view usage] : e.7.1.1 |Carbohydrate phosphatase |Carbohydrate phosphatase |Inositol monophosphatase/fructose-1,6-bisphosphatase-like |Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase |Archaeoglobus fulgidus [TaxId: 2234]
d1aa1b2 : (SER112) (THR147) [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Spinach (Spinacia oleracea) [TaxId: 3562]
d1s1hb_ : (LEU15) (PRO67) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ozbc_ : (GLN110) (MET150) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Haemophilus influenzae [TaxId: 727]
d1qynb_ : (LEU106) (LEU141) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Escherichia coli [TaxId: 562]
d1sg2a_ : (GLY69) (GLN151) [view usage] : f.48.1.1 |OmpH-like |OmpH-like |OmpH-like |Periplasmic chaperon skp (HlpA) |Escherichia coli [TaxId: 562]
d1ozba_ : (GLN110) (GLU159) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Haemophilus influenzae [TaxId: 727]
d1rlcl2 : (SER112) (THR147) [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId: 4097]
d1fx3c_ : (GLN110) (ALA155) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Haemophilus influenzae [TaxId: 727]
d1ozbg_ : (GLU99) (MET150) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Haemophilus influenzae [TaxId: 727]
d3zxwa1 : (SER112) (LYS146) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d1ozbb_ : (GLN110) (ASN151) [view usage] : d.33.1.1 |SecB-like |SecB-like |Bacterial protein-export protein SecB |Bacterial protein-export protein SecB |Haemophilus influenzae [TaxId: 727]
d1ir1a2 : (SER112) (THR147) [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Spinach (Spinacia oleracea) [TaxId: 3562]
d1u2mc_ : (SER78) (GLN159) [view usage] : f.48.1.1 |OmpH-like |OmpH-like |OmpH-like |Periplasmic chaperon skp (HlpA) |Escherichia coli [TaxId: 562]
d1ausl2 : (SER112) (THR147) [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Spinach (Spinacia oleracea) [TaxId: 3562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58, i.1, e.7, d.33, f.48