Tableau information
Concept source: d3ii6a1 amino acid (a.a.) range (LYS63)(LYS115)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS63) (ALA73) H1
(VAL83) (SER89) E2
(CYS93) (LYS99) E3
(VAL104) (LYS115) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -73.0° E2
E3 111.4° 167.0° E3
E4 -65.8° -36.7° 156.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1l2wd_ : (TYR2) (LEU51) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |YopE chaperone SycE |Yersinia pestis [TaxId: 632]
d4i3bf_ : (PRO27) (LYS68) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Eel (Anguilla japonica) [TaxId: 7937]
d3g7nb_ : (ASP4) (SER65) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Penicillium expansum [TaxId: 27334]
d1mowa2 : (ASN6) (LYS43) [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-dmoI |Desulfurococcus mobilis [TaxId: 2274]
d1nxca_ : (PHE440) (HIS471) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Mouse (Mus musculus) [TaxId: 10090]
d4jmfb_ : (PRO3) (GLY55) [view usage] : d.198.1.0 |Secretion chaperone-like |Type III secretory system chaperone-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2flja_ : (GLY27) (PHE66) [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Migratory locust (Locusta migratoria) [TaxId: 7004]
d2isga_ : (ASN15) (PRO46) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
d3ii6a1 : (LYS63) (LYS115) [view usage] : b.59.1.1 |XRCC4, N-terminal domain |XRCC4, N-terminal domain |XRCC4, N-terminal domain |XRCC4, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d3deba_ : (ASP15) (PRO47) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
d1p5ua2 : (THR150) (GLY180) [view usage] : b.7.2.1 |C2 domain-like |Periplasmic chaperone C-domain |Periplasmic chaperone C-domain |Caf1m |Yersinia pestis [TaxId: 632]
d2f96a1 : (HIS20) (PRO66) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Ribonuclease T |Pseudomonas aeruginosa [TaxId: 287]
d1ab0a_ : (GLY26) (SER63) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Adipocyte lipid-binding protein, ALBP |Mouse (Mus musculus) [TaxId: 10090]
d2rcqa_ : (PHE27) (ASP63) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fgza4 : (SER1043) (GLU1072) [view usage] : b.71.1.1 |Glycosyl hydrolase domain |Glycosyl hydrolase domain |alpha-Amylases, C-terminal beta-sheet domain |Pullulanase PulA |Klebsiella pneumoniae [TaxId: 573]
d2g6ta1 : (MSE153) (ASN191) [view usage] : c.147.1.1 |CAC2185-like |CAC2185-like |CAC2185-like |Hypothetical protein CAC2185 |Clostridium acetobutylicum [TaxId: 1488]
d1oq1b_ : (SER15) (HIS41) [view usage] : b.29.1.17 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Hypothetical protein YesU |Hypothetical protein YesU |Bacillus subtilis [TaxId: 1423]
d2uzpa_ : (LEU200) (THR250) [view usage] : b.7.1.2 |C2 domain-like |C2 domain (Calcium/lipid-binding domain, CaLB) |Synaptotagmin-like (S variant) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3m7fa_ : (ASN467) (LEU499) [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1kful3 : (GLU118) (VAL154) [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Human (Homo sapiens), M-type [TaxId: 9606]
d4qmaa_ : (PRO54) (PRO87) [view usage] : b.82.1.19 |Double-stranded beta-helix |RmlC-like cupins |Cysteine dioxygenase type I |Cysteine dioxygenase type I |Ralstonia eutropha [TaxId: 106590]
d3ngya_ : (GLY9) (GLY67) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d3sh1a_ : (GLY150) (PHE204) [view usage] : b.96.1.0 |Nicotinic receptor ligand binding domain-like |Nicotinic receptor ligand binding domain-like |automated matches |automated matches |California sea hare (Aplysia californica) [TaxId: 6500]
d3c88a_ : (ASN15) (PRO46) [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
d1l2wa_ : (TYR2) (LEU51) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |YopE chaperone SycE |Yersinia pestis [TaxId: 632]
d2g6tb_ : (MSE153) (HIS192) [view usage] : c.147.1.1 |CAC2185-like |CAC2185-like |CAC2185-like |Hypothetical protein CAC2185 |Clostridium acetobutylicum [TaxId: 1488]
d2qima_ : (VAL34) (LYS69) [view usage] : d.129.3.1 |TBP-like |Bet v1-like |Pathogenesis-related protein 10 (PR10)-like |automated matches |Yellow lupine (Lupinus luteus) [TaxId: 3873]
d1u79a_ : (ILE67) (GLY127) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP13 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2qn0a_ : (ASP15) (PRO47) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, c.69, b.29, a.102, d.92, d.129, c.55, b.60, d.3, b.96, b.7, d.95, d.93, d.26, b.71, d.198, c.147, b.59