Tableau information
Concept source: d4asie1 amino acid (a.a.) range (ILE1638)(LYS1704)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE1638) (ALA1657) H1
(THR1670) (LEU1676) E2
(GLN1681) (ASN1686) E3
(GLY1695) (LYS1704) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 140.2° E2
E3 -74.3° 145.1° E3
E4 -33.5° 149.5° -59.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2p5xa_ : (ASP103) (GLU154) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1e9sf_ : (PRO420) (ARG460) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Bacterial conjugative coupling protein TrwB |Escherichia coli [TaxId: 562]
d1piea1 : (THR9) (ASP69) [view usage] : d.14.1.5 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |GHMP Kinase, N-terminal domain |Galactokinase |Lactococcus lactis [TaxId: 1358]
d1ztua1 : (THR161) (ARG191) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Bacteriophytochrome BphP |Deinococcus radiodurans [TaxId: 1299]
d1wu2a1 : (SER367) (TYR396) [view usage] : b.85.6.1 |beta-clip |MoeA C-terminal domain-like |MoeA C-terminal domain-like |Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain |Pyrococcus horikoshii, PH1647 [TaxId: 53953]
d1g87b2 : (LEU501) (ASP535) [view usage] : b.2.2.2 |Common fold of diphtheria toxin/transcription factors/cytochrome f |Carbohydrate-binding domain |Cellulose-binding domain family III |Endo/exocellulase:cellobiose E-4, C-terminal domain |Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]
d1nnea4 : (ALA77) (PRO118) [view usage] : d.75.2.1 |MutS N-terminal domain-like |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |Thermus aquaticus [TaxId: 271]
d1dv2a3 : (GLY257) (ARG292) [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |Biotin carboxylase (BC), domain 2 |Escherichia coli [TaxId: 562]
d1za4a1 : (PRO53) (ASP93) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Thrombospondin 1 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d2snii_ : (SER31) (VAL70) [view usage] : d.40.1.1 |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |CI-2 family of serine protease inhibitors |Chymotrypsin inhibitor CI-2 |Barley (Hordeum vulgare) [TaxId: 4513]
d1n5wc2 : (PRO126) (PRO173) [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
d1q55a_ : (ASP180) (ILE211) [view usage] : i.20.1.1 |Ep-cadherin |Ep-cadherin |Ep-cadherin |Ep-cadherin |Mouse (Mus musculus) [TaxId: 10090]
d4asie1 : (ILE1638) (LYS1704) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3g8db2 : (GLY257) (ARG292) [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1l3wa2 : (ASP180) (ILE211) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |C-cadherin ectodomain |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1z3sa_ : (CYS284) (GLU316) [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vaxa1 : (LEU222) (ARG285) [view usage] : d.96.1.4 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |Urate oxidase (uricase) |Urate oxidase (uricase) |Arthrobacter globiformis [TaxId: 1665]
d2m7ua_ : (ARG440) (VAL478) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d2erfa_ : (ASP54) (ASP93) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Thrombospondin 1 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1nkga2 : (PRO470) (LEU506) [view usage] : b.18.1.25 |Galactose-binding domain-like |Galactose-binding domain-like |Rhamnogalacturonase B, RhgB, C-terminal domain |Rhamnogalacturonase B, RhgB, C-terminal domain |Fungus (Aspergillus aculeatus) [TaxId: 5053]
d11asa_ : (LEU73) (VAL122) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Asparagine synthetase |Escherichia coli [TaxId: 562]
d1ewqa4 : (PHE78) (PRO118) [view usage] : d.75.2.1 |MutS N-terminal domain-like |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |Thermus aquaticus [TaxId: 271]
d2cu3b_ : (LEU16) (GLY64) [view usage] : d.15.3.2 |beta-Grasp (ubiquitin-like) |MoaD/ThiS |ThiS |Uncharacterised protein TTHA0675 |Thermus thermophilus [TaxId: 274]
d1mo7a_ : (GLN539) (PRO595) [view usage] : d.220.1.1 |Metal cation-transporting ATPase, ATP-binding domain N |Metal cation-transporting ATPase, ATP-binding domain N |Metal cation-transporting ATPase, ATP-binding domain N |Sodium/potassium-transporting ATPase alpha chain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2ouha_ : (PRO53) (ASP93) [view usage] : b.29.1.4 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Laminin G-like module |Thrombospondin 1 N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d4cw0a2 : (SER226) (ARG294) [view usage] : d.96.1.4 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |Urate oxidase (uricase) |Urate oxidase (uricase) |Aspergillus flavus [TaxId: 5059]
d2wcwd_ : (ASP65) (GLU104) [view usage] : c.52.1.0 |Restriction endonuclease-like |Restriction endonuclease-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1ucga_ : (ALA134) (ALA170) [view usage] : d.124.1.1 |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease MC1 |Bitter gourd (Momordica charantia) [TaxId: 3673]
d1nsnh1 : (THR83) (SER112) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 7.1 [TaxId: 10090]
d1wb9a4 : (VAL76) (PRO116) [view usage] : d.75.2.1 |MutS N-terminal domain-like |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |Escherichia coli [TaxId: 562]
d1ffvc2 : (ALA127) (PRO173) [view usage] : d.145.1.3 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |CO dehydrogenase flavoprotein N-terminal domain-like |Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain |Hydrogenophaga pseudoflava [TaxId: 47421]
d3vv4b_ : (ASP11) (ALA51) [view usage] : d.110.2.0 |Profilin-like |GAF domain-like |automated matches |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d3m7va2 : (LEU179) (LEU226) [view usage] : d.327.1.1 |DeoB insert domain-like |DeoB insert domain-like |DeoB insert domain-like |Phosphopentomutase DeoB |Streptococcus mutans [TaxId: 1309]
d1ng9a4 : (VAL76) (PRO116) [view usage] : d.75.2.1 |MutS N-terminal domain-like |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |Escherichia coli [TaxId: 562]
d2klia_ : (LEU31) (GLY70) [view usage] : d.110.2.1 |Profilin-like |GAF domain-like |GAF domain |Sensor protein CYB2465 |Synechococcus sp. [TaxId: 321332]
d3bplb2 : (ALA162) (HIS197) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vfna_ : (ASP479) (ILE506) [view usage] : b.80.1.6 |Single-stranded right-handed beta-helix |Pectin lyase-like |P22 tailspike protein |P22 tailspike protein |Salmonella phage P22 [TaxId: 10754]
d2j3zd2 : (ASP325) (GLU371) [view usage] : d.166.1.0 |ADP-ribosylation |ADP-ribosylation |automated matches |automated matches |Clostridium botulinum [TaxId: 1491]
d2bh7a2 : (PHE41) (LEU75) [view usage] : d.118.1.1 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |Probable N-acetylmuramoyl-L-alanine amidase YbjR, N-terminal domain |Escherichia coli [TaxId: 562]
d1b7go2 : (ALA257) (GLN300) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Sulfolobus solfataricus [TaxId: 2287]
d1oh5a4 : (VAL76) (PRO116) [view usage] : d.75.2.1 |MutS N-terminal domain-like |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |DNA repair protein MutS, domain I |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, b.29, c.14, c.37, d.104, d.166, d.171, b.18, d.14, d.81, b.2, d.96, b.85, b.1, d.110, d.124, c.51, d.118, d.142, c.52,
d.145, d.15, i.20, d.220, d.40, d.75, d.327