Tableau information
Concept source: d4qtba_ amino acid (a.a.) range (VAL38)(SER74)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL38) (THR43) H1
(ILE48) (ALA52) E2
(GLY54) (SER58) E3
(VAL68) (SER74) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 146.0° E2
E3 -36.4° 168.5° E3
E4 -156.1° -23.9° 161.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ei3b_ : (GLY299) (ASN337) [view usage] : i.9.1.1 |Blood clotting |Blood clotting |Blood clotting |Fibrinogen |Chicken (Gallus gallus) [TaxId: 9031]
d4begb_ : (ASP6) (ASP70) [view usage] : b.17.1.0 |PEBP-like |PEBP-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2xuua_ : (ASN8) (LYS45) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3k5la1 : (PRO110) (PRO142) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
d3c0ha_ : (LEU7) (ASP44) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2w4ka_ : (ASN8) (LYS45) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yaaa_ : (LYS8) (LYS45) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3zpya_ : (SER201) (GLY253) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Zobellia galactanivorans [TaxId: 63186]
d2b0ta_ : (GLU414) (LYS458) [view usage] : c.77.1.2 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Monomeric isocitrate dehydrogenase |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d4l3wa_ : (CYS67) (GLY109) [view usage] : c.69.1.17 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Fungal lipases |automated matches |Rhizopus microsporus [TaxId: 4843]
d1s5ad_ : (ASP63) (TYR108) [view usage] : d.17.4.10 |Cystatin-like |NTF2-like |PhzA/PhzB-like |Hypothetical protein YesE |Bacillus subtilis [TaxId: 1423]
d4b4la_ : (ASN8) (LYS45) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sn2a2 : (ASN823) (PHE865) [view usage] : c.8.2.0 |The "swivelling" beta/beta/alpha domain |LeuD/IlvD-like |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1a63a2 : (SER82) (LYS115) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Rho termination factor, RNA-binding domain |Escherichia coli [TaxId: 562]
d1pv4a2 : (PRO83) (LYS115) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Rho termination factor, RNA-binding domain |Escherichia coli [TaxId: 562]
d1s5ab_ : (ASP63) (TYR108) [view usage] : d.17.4.10 |Cystatin-like |NTF2-like |PhzA/PhzB-like |Hypothetical protein YesE |Bacillus subtilis [TaxId: 1423]
d2hd9a1 : (PRO25) (PRO96) [view usage] : b.122.1.8 |PUA domain-like |PUA domain-like |Atu2648/PH1033-like |Hypothetical protein PH1033 |Pyrococcus horikoshii [TaxId: 53953]
d1tova_ : (ASN133) (LYS183) [view usage] : b.34.10.1 |SH3-like barrel |Cap-Gly domain |Cap-Gly domain |Cytoskeleton-associated protein F53F4.3 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1q47b_ : (SER96) (VAL146) [view usage] : b.69.12.1 |7-bladed beta-propeller |Sema domain |Sema domain |Semaphorin 3a |Mouse (Mus musculus) [TaxId: 10090]
d2y7ja_ : (PRO12) (GLU56) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1svja_ : (GLU348) (GLY396) [view usage] : d.220.1.1 |Metal cation-transporting ATPase, ATP-binding domain N |Metal cation-transporting ATPase, ATP-binding domain N |Metal cation-transporting ATPase, ATP-binding domain N |Potassium-transporting ATPase B chain, KdpB |Escherichia coli [TaxId: 562]
d1lpla_ : (ASP136) (LYS183) [view usage] : b.34.10.1 |SH3-like barrel |Cap-Gly domain |Cap-Gly domain |Cytoskeleton-associated protein F53F4.3 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2d6fa1 : (GLY5) (ASP40) [view usage] : b.38.3.1 |Sm-like fold |GatD N-terminal domain-like |GatD N-terminal domain-like |Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD |Methanobacterium thermoautotrophicum [TaxId: 145262]
d4k2ha_ : (LEU110) (GLY152) [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, b.69, b.29, c.77, c.23, d.144, b.40, c.55, b.122, c.8, d.17, b.34, b.38, b.17, i.9, d.220