Tableau information
Concept source: d1zoha_ amino acid (a.a.) range (GLU35)(PRO72)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU35) (GLU40) H1
(VAL45) (LYS49) E2
(SER51) (GLU55) E3
(ILE66) (PRO72) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -129.9° E2
E3 55.3° 172.6° E3
E4 -127.6° -23.4° 160.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3mhab_ : (SER173) (SER222) [view usage] : b.125.1.0 |LolA-like prokaryotic lipoproteins and lipoprotein localization factors |Prokaryotic lipoproteins and lipoprotein localization factors |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2oikc_ : (CYS11) (LEU46) [view usage] : d.13.1.1 |HIT-like |HIT-like |HIT (HINT, histidine triad) family of protein kinase-interacting proteins |Histidine triad protein Mfla2506 |Methylobacillus flagellatus [TaxId: 405]
d1fx7b3 : (ILE178) (PRO218) [view usage] : b.34.1.2 |SH3-like barrel |C-terminal domain of transcriptional repressors |FeoA-like |Iron-dependent regulator IdeR |Mycobacterium tuberculosis [TaxId: 1773]
d1i80b_ : (ALA41) (GLY87) [view usage] : c.56.2.1 |Phosphorylase/hydrolase-like |Purine and uridine phosphorylases |Purine and uridine phosphorylases |Purine nucleoside phosphorylase, PNP |Mycobacterium tuberculosis [TaxId: 1773]
d3tzua_ : (SER38) (ALA79) [view usage] : b.84.1.0 |Barrel-sandwich hybrid |Single hybrid motif |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
d3mm5b1 : (HIS20) (GLY57) [view usage] : d.58.36.2 |Ferredoxin-like |Nitrite/Sulfite reductase N-terminal domain-like |DsrA/DsrB N-terminal-domain-like |Dissimilatory sulfite reductase subunit beta, DsrB |Archaeoglobus fulgidus [TaxId: 2234]
d1rzub_ : (TYR44) (ALA85) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Agrobacterium tumefaciens [TaxId: 358]
d3ebmd_ : (ARG107) (PHE163) [view usage] : b.88.1.2 |Mss4-like |Mss4-like |Translationally controlled tumor protein TCTP (histamine-releasing factor) |Translationally controlled tumor protein TCTP (histamine-releasing factor) |Human (Homo sapiens) [TaxId: 9606]
d2i9wa1 : (ILE85) (GLU133) [view usage] : d.17.4.30 |Cystatin-like |NTF2-like |SEC-C associated NTF2-like domain |Hypothetical protein Psyc2064 |Psychrobacter arcticus [TaxId: 334543]
d1veab_ : (GLY89) (ASN146) [view usage] : d.275.1.1 |Hut operon positive regulatory protein HutP |Hut operon positive regulatory protein HutP |Hut operon positive regulatory protein HutP |Hut operon positive regulatory protein HutP |Bacillus subtilis [TaxId: 1423]
d4q61b_ : (ASN2) (ILE40) [view usage] : d.13.1.0 |HIT-like |HIT-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d1u7ha_ : (GLY18) (PRO75) [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Ornithine cyclodeaminase |Pseudomonas putida [TaxId: 303]
d1rzva_ : (TYR44) (ALA85) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Agrobacterium tumefaciens [TaxId: 358]
d2lt9a_ : (GLY575) (GLU625) [view usage] : b.1.27.1 |Immunoglobulin-like beta-sandwich |CalX-like |CalX-beta domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2jxya_ : (LEU417) (PHE453) [view usage] : b.66.1.0 |4-bladed beta-propeller |Hemopexin-like domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2edga_ : (ASN30) (SER71) [view usage] : b.84.1.0 |Barrel-sandwich hybrid |Single hybrid motif |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1gbna_ : (THR39) (PHE79) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Ornithine aminotransferase |Human (Homo sapiens) [TaxId: 9606]
d1n7ua_ : (ILE506) (LEU555) [view usage] : b.126.1.1 |Adsorption protein p2 |Adsorption protein p2 |Adsorption protein p2 |Adsorption protein p2 |Bacteriophage PRD1 [TaxId: 10658]
d1tsfa_ : (ASN27) (ALA57) [view usage] : b.137.1.1 |Rof/RNase P subunit-like |Rof/RNase P subunit-like |RNase P subunit p29-like |Hypothetical protein AF1917 |Archaeoglobus fulgidus [TaxId: 2234]
d2o3cb_ : (ASN264) (LEU308) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1x7db_ : (GLY18) (HIS74) [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Ornithine cyclodeaminase |Pseudomonas putida [TaxId: 303]
d2oika1 : (CYS11) (LEU46) [view usage] : d.13.1.1 |HIT-like |HIT-like |HIT (HINT, histidine triad) family of protein kinase-interacting proteins |Histidine triad protein Mfla2506 |Methylobacillus flagellatus [TaxId: 405]
d1x7da_ : (GLY18) (PRO75) [view usage] : c.2.1.13 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Ornithine cyclodeaminase-like |Ornithine cyclodeaminase |Pseudomonas putida [TaxId: 303]
d2o3ca_ : (ASN264) (LEU308) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d1rzua_ : (TYR44) (ALA85) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |Glycogen synthase 1, GlgA |Agrobacterium tumefaciens [TaxId: 358]
d1oqka_ : (HIS24) (PRO55) [view usage] : b.137.1.1 |Rof/RNase P subunit-like |Rof/RNase P subunit-like |RNase P subunit p29-like |Hypothetical protein MTH11 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1v76a_ : (HIS60) (PRO89) [view usage] : b.137.1.1 |Rof/RNase P subunit-like |Rof/RNase P subunit-like |RNase P subunit p29-like |Hypothetical protein PH1771 |Pyrococcus horikoshii [TaxId: 53953]
d1ewia_ : (LEU5) (SER55) [view usage] : b.40.4.3 |OB-fold |Nucleic acid-binding proteins |Single strand DNA-binding domain, SSB |Replication protein A 70 KDa subunit (RPA70) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.2, d.58, c.56, d.144, b.40, d.151, c.87, b.1, b.125, d.17, b.84, b.34, b.88, d.13, b.66, b.126, b.137, d.275