Protein Concepts Dictionary

Tableau information

Concept source:  d1oghb_  amino acid (a.a.) range (SER4)(ASP45)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER4)   (LYS15) H1
	   (ILE17)   (PRO21) E2
	   (TYR32)   (ASP38) E3
	   (ASP38)   (ASP45) E4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
E2      -79.1°   E2                   
E3      -63.6°   40.3°   E3            
E4       92.6°  100.5°  -65.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xs4a_ :     (ASP5)   (HIS47)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
 d2qxxa_ :     (SER4)   (PHE43)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d2qlpa_ :     (SER4)   (PHE43)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d1iylb1 :   (ARG134)  (LEU162)   [view usage] : d.108.1.2 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-myristoyl transferase, NMT |N-myristoyl transferase, NMT |Yeast (Candida albicans) [TaxId: 5476]
 d2qlpd_ :     (SER4)   (THR46)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d3gf0a_ :     (SER4)   (TYR43)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d2qlpb_ :     (SER4)   (THR46)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d2hxda_ :     (SER4)   (TYR43)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Bifunctional dCTP deaminase/dUTPase |Methanococcus jannaschii [TaxId: 2190]
 d1xs1a_ :     (CYS4)   (HIS47)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
 d4a6ab_ :     (SER4)   (PHE43)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d4a6aa_ :     (SER4)   (PHE43)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d2qlpf_ :     (SER4)   (THR46)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d2j4ha_ :     (CYS4)   (PHE44)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.85,   d.108