Tableau information
Concept source: d1w6sa_ amino acid (a.a.) range (LEU225)(PRO264)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU225) (GLU231) H1
(GLY238) (GLY244) E2
(GLY244) (ASP249) E3
(ASN253) (PRO264) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 126.3° E2
E3 151.6° -67.3° E3
E4 -14.1° 134.2° 155.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vh9a_ : (TYR88) (GLU117) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Tropaeolum majus [TaxId: 4020]
d4mata_ : (LEU146) (HIS185) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Methionine aminopeptidase |Escherichia coli [TaxId: 562]
d1yf5l2 : (LEU81) (ASP114) [view usage] : c.55.1.11 |Ribonuclease H-like motif |Actin-like ATPase domain |Cyto-EpsL domain |Cytoplasmic domain of general secretion pathway protein L, EpsL |Vibrio cholerae [TaxId: 666]
d3dr6c_ : (ALA125) (ASP163) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |automated matches |Salmonella typhimurium [TaxId: 90371]
d3ofta_ : (ALA348) (TRP394) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
d1yuba_ : (HIS146) (HIS178) [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |rRNA adenine dimethylase |Streptococcus pneumoniae, Ermam [TaxId: 1313]
d4dq0a_ : (GLU155) (LYS197) [view usage] : c.66.1.44 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TehB-like |automated matches |Escherichia coli [TaxId: 386585]
d3gkab_ : (ASP115) (GLU152) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d1sroa_ : (LYS45) (GLU75) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase |Escherichia coli [TaxId: 562]
d3ebta1 : (HIS51) (THR91) [view usage] : d.17.4.9 |Cystatin-like |NTF2-like |SnoaL-like polyketide cyclase |Uncharacterized protein BPSS0132 |Burkholderia pseudomallei [TaxId: 28450]
d4ab4a_ : (HIS107) (PRO140) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d2yvla_ : (ALA193) (ARG244) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
d3nv6a_ : (MET367) (PRO414) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
d1z5cb2 : (GLY318) (GLY359) [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
d1io8a_ : (ALA320) (SER366) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp119 |Sulfolobus solfataricus [TaxId: 2287]
d2a8va2 : (SER82) (LYS115) [view usage] : b.40.4.5 |OB-fold |Nucleic acid-binding proteins |Cold shock DNA-binding domain-like |Rho termination factor, RNA-binding domain |Escherichia coli [TaxId: 562]
d1h4ja_ : (LEU225) (PRO264) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylobacterium extorquens [TaxId: 408]
d1z7mb_ : (THR86) (GLY133) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |ATP phosphoribosyltransferase regulatory subunit HisZ |Lactococcus lactis [TaxId: 1358]
d4nhfa_ : (ALA145) (GLN179) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Bartonella grahamii [TaxId: 634504]
d3zpia_ : (ALA357) (ARG406) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d1j1ha_ : (HIS82) (LYS123) [view usage] : b.111.1.1 |Small protein B (SmpB) |Small protein B (SmpB) |Small protein B (SmpB) |Small protein B (SmpB) |Thermus thermophilus [TaxId: 274]
d2xvad_ : (GLU155) (LYS197) [view usage] : c.66.1.44 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TehB-like |automated matches |Escherichia coli [TaxId: 511145]
d1mwsa1 : (GLU59) (THR103) [view usage] : d.17.4.5 |Cystatin-like |NTF2-like |Penicillin binding protein 2a (PBP2A), N-terminal domain |Penicillin binding protein 2a (PBP2A), N-terminal domain |Staphylococcus aureus [TaxId: 1280]
d4dkia1 : (VAL60) (THR103) [view usage] : d.17.4.5 |Cystatin-like |NTF2-like |Penicillin binding protein 2a (PBP2A), N-terminal domain |Penicillin binding protein 2a (PBP2A), N-terminal domain |Staphylococcus aureus [TaxId: 1280]
d1g72a_ : (LEU219) (PRO258) [view usage] : b.70.1.1 |8-bladed beta-propeller |Quinoprotein alcohol dehydrogenase-like |Quinoprotein alcohol dehydrogenase-like |Methanol dehydrogenase, heavy chain |Methylophilus methylotrophus, w3a1 [TaxId: 17]
d3gkaa_ : (ASP115) (GLU152) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d4ep6a_ : (GLN506) (SER552) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodococcus rhodochrous [TaxId: 1829]
d3unza_ : (ALA129) (LEU149) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Aurora-related kinase 1 (aurora-2) |Human (Homo sapiens) [TaxId: 9606]
d4iwna_ : (SER210) (LEU241) [view usage] : c.66.1.14 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Hypothetical protein HI0319 (YecO) |automated matches |Escherichia coli [TaxId: 562]
d2z7aa_ : (LYS57) (ASP100) [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Hypothetical protein Rv0760c |Mycobacterium tuberculosis H37Rv [TaxId: 83332]
d1f4ua_ : (GLY319) (ARG363) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp119 |Sulfolobus solfataricus [TaxId: 2287]
d1xnza_ : (LEU146) (HIS185) [view usage] : d.127.1.1 |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Creatinase/aminopeptidase |Methionine aminopeptidase |Escherichia coli [TaxId: 562]
d3reoa2 : (GLU335) (LYS366) [view usage] : c.66.1.12 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Plant O-methyltransferase, C-terminal domain |automated matches |Clarkia breweri [TaxId: 36903]
d1ywgo2 : (VAL285) (TRP316) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1mx0d2 : (GLY318) (GLY359) [view usage] : d.14.1.3 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |DNA gyrase/MutL, second domain |Topoisomerase VI-B subunit |Sulfolobus shibatae [TaxId: 2286]
d3weca_ : (SER364) (ARG411) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodococcus erythropolis [TaxId: 1833]
d1gcua2 : (ILE169) (THR206) [view usage] : d.81.1.4 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |Biliverdin reductase |Biliverdin reductase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4dxya_ : (MET366) (PRO413) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.70, c.1, a.104, b.29, c.66, d.144, b.40, d.104, c.55, d.14, d.81, d.127, d.108, d.17, b.111