Tableau information
Concept source: d3jv5c_ amino acid (a.a.) range (SER277)(PRO327)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER277) (VAL281) H1
(TYR285) (HIS295) E2
(ARG301) (LEU309) E3
(LYS321) (PRO327) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -134.8° E2
E3 -72.2° 139.4° E3
E4 134.6° -43.2° 145.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1bfsa_ : (SER299) (PRO349) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p50 subunit of NF-kappa B transcription factor |Mouse (Mus musculus) [TaxId: 10090]
d1ojva2 : (LYS78) (VAL123) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |Complement decay-accelerating factor (Daf, CD55) |Human (Homo sapiens) [TaxId: 9606]
d1nuna_ : (SER69) (LYS103) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibroblast growth factor-10, FGF10 |Human (Homo sapiens) [TaxId: 9606]
d2ed6a1 : (THR32) (ASP73) [view usage] : b.170.1.1 |WSSV envelope protein-like |WSSV envelope protein-like |WSSV envelope protein-like |Envelope protein VP28 |White spot syndrome virus, WSSV [TaxId: 92652]
d1iknc_ : (SER299) (PRO349) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p50 subunit of NF-kappa B transcription factor |Mouse (Mus musculus) [TaxId: 10090]
d1roca_ : (VAL11) (GLY63) [view usage] : b.1.22.1 |Immunoglobulin-like beta-sandwich |ASF1-like |ASF1-like |Anti-silencing protein 1, ASF1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3njeb_ : (SER163) (PRO196) [view usage] : d.24.1.0 |Pili subunits |Pili subunits |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d3k77a_ : (ARG118) (SER151) [view usage] : b.18.1.8 |Galactose-binding domain-like |Galactose-binding domain-like |N-terminal domain of xrcc1 |N-terminal domain of xrcc1 |Human (Homo sapiens) [TaxId: 9606]
d1ltxa2 : (PRO305) (CYS342) [view usage] : b.7.4.1 |C2 domain-like |Rab geranylgeranyltransferase alpha-subunit, insert domain |Rab geranylgeranyltransferase alpha-subunit, insert domain |Rab geranylgeranyltransferase alpha-subunit, insert domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jsga_ : (THR63) (TYR96) [view usage] : b.63.1.1 |Oncogene products |Oncogene products |Oncogene products |p14-TCL1 |Human (Homo sapiens) [TaxId: 9606]
d4l3ka1 : (HIS9) (LYS48) [view usage] : b.107.1.1 |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |Urease metallochaperone UreE, N-terminal domain |automated matches |Sporosarcina pasteurii [TaxId: 1474]
d1wara_ : (SER97) (ASP135) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1le5b1 : (SER299) (PRO349) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p50 subunit of NF-kappa B transcription factor |Mouse (Mus musculus) [TaxId: 10090]
d1c1za5 : (LYS262) (PRO304) [view usage] : g.18.1.1 |Complement control module/SCR domain |Complement control module/SCR domain |Complement control module/SCR domain |beta2-glycoprotein I |Human (Homo sapiens) [TaxId: 9606]
d2nzxc_ : (GLY76) (MET122) [view usage] : c.87.1.11 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |FucT-like |Alpha1,3-fucosyltransferase FucT |Helicobacter pylori [TaxId: 210]
d1oa8d_ : (LYS595) (LEU646) [view usage] : b.145.1.1 |AXH domain |AXH domain |AXH domain |Ataxin-1 |Human (Homo sapiens) [TaxId: 9606]
d2psoa1 : (ILE914) (GLU958) [view usage] : d.129.3.2 |TBP-like |Bet v1-like |STAR domain |Star-related lipid transfer protein 13 |Human (Homo sapiens) [TaxId: 9606]
d3jv5b_ : (SER277) (TYR326) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1u3za_ : (SER299) (PRO349) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |p50 subunit of NF-kappa B transcription factor |Mouse (Mus musculus) [TaxId: 10090]
d1cl3a_ : (SER82) (PHE127) [view usage] : b.54.1.1 |Core binding factor beta, CBF |Core binding factor beta, CBF |Core binding factor beta, CBF |Core binding factor beta, CBF |Human (Homo sapiens) [TaxId: 9606]
d2h7ta_ : (PRO190) (CYS249) [view usage] : g.28.1.0 |Thyroglobulin type-1 domain |Thyroglobulin type-1 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4v193_ : (ILE103) (VAL147) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
d1p35b_ : (CYS137) (PRO181) [view usage] : b.28.1.1 |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |Baculovirus p35 protein |AcMNPV (Autographa californica nuclear polyhedrosis virus) [TaxId: 46015]
d3jv5c_ : (SER277) (PRO327) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1jpya_ : (ASN43) (GLU96) [view usage] : g.17.1.6 |Cystine-knot cytokines |Cystine-knot cytokines |Interleukin 17F, IL-17F |Interleukin 17F, IL-17F |Human (Homo sapiens) [TaxId: 9606]
d1jnda2 : (ASN327) (SER369) [view usage] : d.26.3.1 |FKBP-like |Chitinase insertion domain |Chitinase insertion domain |Imaginal disc growth factor-2 |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.159, i.1, d.129, b.18, c.87, b.1, b.42, b.145, b.7, d.26, g.17, g.18, d.24, g.28, b.28, b.170, b.54, b.63, b.107