Tableau information
Concept source: d1hilb1 amino acid (a.a.) range (SER28)(PRO60)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER28) (GLY33) H1
(GLY33) (PRO41) E2
(ARG44) (SER52) E3
(GLY55) (PRO60) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 69.7° E2
E3 -114.7° 162.2° E3
E4 49.3° -22.2° 162.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2grka_ : (ASP175) (GLY214) [view usage] : b.27.1.1 |Soluble secreted chemokine inhibitor, VCCI |Soluble secreted chemokine inhibitor, VCCI |Soluble secreted chemokine inhibitor, VCCI |automated matches |Ectromelia virus [TaxId: 265874]
d1hqnc2 : (PRO321) (SER382) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d1cjdc2 : (PRO321) (TYR377) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d4hiza2 : (PRO679) (ALA717) [view usage] : b.108.1.0 |Triple-stranded beta-helix |Phage fibre proteins |automated matches |automated matches |Enterobacteria phage [TaxId: 948870]
d1c39a_ : (SER16) (GLN68) [view usage] : b.64.1.1 |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Mannose 6-phosphate receptor domain |Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain |Cow (Bos taurus) [TaxId: 9913]
d1b2va_ : (THR38) (GLY71) [view usage] : d.35.1.1 |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Heme-binding protein A (HasA) |Serratia marcescens [TaxId: 615]
d1n6ua2 : (ILE158) (LEU203) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |Interferon-alpha/beta receptor beta chain |Human (Homo sapiens) [TaxId: 9606]
d4tr8b2 : (ARG152) (ASP183) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 983919]
d1gw7c_ : (PRO3321) (SER3382) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
d1qmea4 : (SER504) (GLN590) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 2x (pbp-2x), transpeptidase domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d4mqpb_ : (THR9) (LEU58) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1v0ea2 : (PRO833) (GLY871) [view usage] : b.108.1.3 |Triple-stranded beta-helix |Phage fibre proteins |Endo-alpha-sialidase |Endo-alpha-sialidase |Bacteriophage K1F [TaxId: 344021]
d4cxrb_ : (THR9) (LEU58) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2ahmg1 : (TYR140) (ALA167) [view usage] : d.302.1.1 |Coronavirus NSP8-like |Coronavirus NSP8-like |Coronavirus NSP8-like |Nonstructural protein 8, NSP8 |SARS coronavirus [TaxId: 227859]
d1p9sb_ : (ILE140) (SER175) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus 229E [TaxId: 11137]
d3i17a_ : (ALA34) (PHE65) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Cellular retinoic-acid-binding protein (CRABP) |Human (Homo sapiens), CRABP-II [TaxId: 9606]
d1cjda2 : (ASP320) (TYR377) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d3ea7b_ : (LEU141) (ASP176) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
d2xura2 : (ARG152) (PRO183) [view usage] : d.131.1.0 |DNA clamp |DNA clamp |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1jqja2 : (ARG152) (PRO183) [view usage] : d.131.1.1 |DNA clamp |DNA clamp |DNA polymerase III, beta subunit |DNA polymerase III, beta subunit |Escherichia coli [TaxId: 562]
d4mqpa_ : (THR9) (LEU58) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d4kqqa2 : (PRO451) (ASP525) [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1epfa2 : (ASP138) (VAL189) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Neural cell adhesion molecule (NCAM) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1w8xe_ : (PRO321) (GLU378) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PRD1 capsid assembly |Bacteriophage PRD1 [TaxId: 10658]
d1cjdb2 : (PRO321) (TYR377) [view usage] : b.121.2.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group II dsDNA viruses VP |Coat protein p3 |Coat protein p3 |Bacteriophage PRD1 [TaxId: 10658]
d1hb5c_ : (PRO321) (SER382) [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, c.67, b.47, i.6, b.60, b.121, b.1, d.131, b.64, b.27, d.35, d.302, b.108