Tableau information
Concept source: d1ns0b_ amino acid (a.a.) range (SER182)(LYS213)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER182) (HIS186) H1
(HIS186) (ALA191) E2
(SER193) (LYS199) E3
(ASP208) (LYS213) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -54.7° E2
E3 -159.8° 105.4° E3
E4 -57.3° -110.2° 139.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1oscd_ : (GLU21) (SER60) [view usage] : d.58.5.2 |Ferredoxin-like |GlnB-like |Divalent ion tolerance proteins CutA (CutA1) |Mammalian CutA-like protein |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1z7zi3 : (PRO45) (VAL82) [view usage] : b.1.1.4 |Immunoglobulin-like beta-sandwich |Immunoglobulin |I set domains |Intercellular adhesion molecule-1, ICAM-1 |Human (Homo sapiens) [TaxId: 9606]
d3k5la2 : (GLU579) (LYS615) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Escherichia coli [TaxId: 562]
d2rmpa_ : (SER68) (GLY89) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Acid protease |Rhizomucor miehei [TaxId: 4839]
d2uwaa_ : (TYR9) (GLN36) [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Tropaeolum majus [TaxId: 4020]
d3q5va_ : (GLU12) (ARG44) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |automated matches |Thermococcus thioreducens [TaxId: 277988]
d2bufc_ : (VAL108) (ASP155) [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1udea_ : (ASN12) (ARG44) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Pyrococcus horikoshii [TaxId: 53953]
d1barb_ : (PRO4) (LYS35) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Acidic FGF (FGF1) |Cow (Bos taurus) [TaxId: 9913]
d1avka1 : (ARG479) (HIS517) [view usage] : b.30.2.1 |Supersandwich |Amine oxidase catalytic domain |Amine oxidase catalytic domain |Copper amine oxidase, domain 3 |Arthrobacter globiformis [TaxId: 1665]
d1nsua_ : (SER182) (LYS213) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
d2df4b2 : (ARG54) (SER93) [view usage] : d.128.1.5 |Glutamine synthetase/guanido kinase |Glutamine synthetase/guanido kinase |GatB/GatE catalytic domain-like |Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain |Staphylococcus aureus [TaxId: 1280]
d1ns0a_ : (SER182) (LYS213) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
d1hmra_ : (GLY26) (SER63) [view usage] : b.60.1.2 |Lipocalins |Lipocalins |Fatty acid binding protein-like |Muscle fatty acid binding protein (m-fabp) |Human (Homo sapiens) [TaxId: 9606]
d1j6ua3 : (GLU162) (GLY180) [view usage] : c.72.2.1 |Ribokinase-like |MurD-like peptide ligases, catalytic domain |MurCDEF |UDP-N-acetylmuramate-alanine ligase MurC |Thermotoga maritima [TaxId: 2336]
d2jeua_ : (SER98) (THR132) [view usage] : b.91.1.0 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |automated matches |automated matches |Bovine papillomavirus type 1 [TaxId: 10559]
d1udeb_ : (ASN12) (ARG44) [view usage] : b.40.5.1 |OB-fold |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Inorganic pyrophosphatase |Pyrococcus horikoshii [TaxId: 53953]
d1g82a_ : (THR52) (ARG86) [view usage] : b.42.1.1 |beta-Trefoil |Cytokine |Fibroblast growth factors (FGF) |Fibroblast growth factor 9, FGF9 |Human (Homo sapiens) [TaxId: 9606]
d3szya_ : (GLY330) (GLY378) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d3t02a_ : (GLY330) (GLY378) [view usage] : c.76.1.0 |Alkaline phosphatase-like |Alkaline phosphatase-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1ns2a_ : (SER182) (LYS213) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
d3ppsa3 : (ILE388) (HIS437) [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Thielavia arenaria [TaxId: 113610]
d1l7ja_ : (SER182) (LYS213) [view usage] : b.30.5.4 |Supersandwich |Galactose mutarotase-like |Aldose 1-epimerase (mutarotase) |Galactose mutarotase |Lactococcus lactis [TaxId: 1358]
d2f2fa1 : (PRO71) (PRO103) [view usage] : b.42.2.1 |beta-Trefoil |Ricin B-like lectins |Ricin B-like |Cytolethal distending toxin subunit A |Actinobacillus actinomycetemcomitans [TaxId: 714]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.76, d.58, b.29, b.30, b.50, c.72, b.40, b.60, b.6, b.1, c.73, b.42, b.91, d.128