Protein Concepts Dictionary

Tableau information

Concept source:  d1mkpa_  amino acid (a.a.) range (VAL289)(LEU347)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL289)  (ALA295) E1
	  (ARG299)  (LEU312) H2
	  (SER315)  (SER328) H3
	  (PHE336)  (LEU347) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
H2      148.9°   H2                   
H3      -87.1°  119.4°   H3            
H4      150.3°  -14.2°  122.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bzca_ :   (VAL211)  (MET282)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d3a5ja_ :   (VAL211)  (MET282)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2g6zb_ :   (GLY257)  (ILE317)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2y96a_ :   (HIS140)  (ARG205)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1od5a2 :   (ASN449)  (GLN484)   [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]
 d3a5ka_ :   (VAL211)  (ILE281)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3i9sd_ :     (VAL3)   (TYR41)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
 d2cmba_ :   (VAL211)  (PHE280)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1d5ra2 :   (HIS118)  (HIS185)   [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d4jvna_ :    (LEU40)   (ILE78)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
 d3lj8a_ :   (CYS284)  (LEU346)   [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ipkb1 :   (GLY133)  (VAL172)   [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]
 d1knja_ :     (MSE1)   (GLN85)   [view usage] : d.79.5.1 |Bacillus chorismate mutase-like |IpsF-like |IpsF-like |2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |Escherichia coli [TaxId: 562]
 d1gheb_ :     (HIS3)   (GLY60)   [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Tabtoxin resistance protein |Pseudomonas syringae [TaxId: 317]
 d4jlya_ :     (GLN4)   (HIS49)   [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
 d2fh7a2 :  (ILE1876) (SER1942)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1g4wr2 :   (LEU476)  (MET539)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |SptP tyrosine phosphatase, catalytic domain |Salmonella typhimurium [TaxId: 90371]
 d1mkpa_ :   (VAL289)  (LEU347)   [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Mapk phosphatase |Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]
 d2g8ya_ :     (SER3)   (GLY63)   [view usage] : c.122.1.0 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1bf2a3 :   (VAL180)  (LEU209)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Isoamylase, central domain |Pseudomonas amyloderamosa [TaxId: 32043]
 d1r6ha_ :   (SER101)  (TYR155)   [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Protein tyrosine phosphatase type IVa |Human (Homo sapiens), pr-3 [TaxId: 9606]
 d2f6fa_ :   (VAL211)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d2hcma_ :    (SER90)  (ALA153)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1q1ma_ :   (VAL211)  (GLY283)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
 d2cm3a_ :   (VAL211)  (PHE280)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3kwby_ :  (PRO2015) (GLY2065)   [view usage] : d.3.1.1 |Cysteine proteinases |Cysteine proteinases |Papain-like |(Pro)cathepsin K |Human (Homo sapiens) [TaxId: 9606]
 d1hy3b_ :    (LEU40)   (ILE78)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
 d4jvla_ :    (LEU40)   (ILE78)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
 d2r0ba_ :   (LYS115)  (ALA176)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,    b.82,    c.45,    c.37,     d.3,   d.108,   c.122,    d.79