Tableau information
Concept source: d3gk0e_ amino acid (a.a.) range (ALA217)(HIS254)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA217) (HIS223) E1
(HIS223) (ALA229) H2
(ALA229) (GLY233) H3
(GLY233) (HIS254) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -51.0° H2
H3 -88.3° -44.3° H3
H4 147.2° 128.3° 111.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3vgda2 : (ASP303) (LYS340) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Glycosyltrehalose trehalohydrolase, central domain |Sulfolobus solfataricus, km1 [TaxId: 2287]
d2bena_ : (HIS28) (GLY61) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Chitin-binding protein CBP21 |Serratia marcescens [TaxId: 615]
d1np2a_ : (PRO157) (GLY210) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Thermus nonproteolyticus [TaxId: 116039]
d4di6c_ : (LEU42) (ILE74) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d1v96b_ : (PHE33) (ILE66) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PH0500 |Pyrococcus horikoshii [TaxId: 53953]
d2bema_ : (HIS28) (GLY61) [view usage] : b.1.18.2 |Immunoglobulin-like beta-sandwich |E set domains |E-set domains of sugar-utilizing enzymes |Chitin-binding protein CBP21 |Serratia marcescens [TaxId: 615]
d1tuba2 : (GLN372) (VAL437) [view usage] : d.79.2.1 |Bacillus chorismate mutase-like |Tubulin C-terminal domain-like |Tubulin, C-terminal domain |Tubulin alpha-subunit |Pig (Sus scrofa) [TaxId: 9823]
d4a02a_ : (HIS29) (ALA65) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
d3gk0c_ : (ALA217) (LEU253) [view usage] : c.1.24.0 |TIM beta/alpha-barrel |Pyridoxine 5'-phosphate synthase |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d3gk0d_ : (ALA217) (HIS254) [view usage] : c.1.24.0 |TIM beta/alpha-barrel |Pyridoxine 5'-phosphate synthase |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d4qs5a_ : (LEU14) (ASP68) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
d4kl8s_ : (ALA5) (LEU38) [view usage] : e.19.1.1 |HydA/Nqo6-like |HydA/Nqo6-like |Nickel-iron hydrogenase, small subunit |automated matches |Desulfomicrobium baculatum [TaxId: 899]
d3gk0e_ : (ALA217) (HIS254) [view usage] : c.1.24.0 |TIM beta/alpha-barrel |Pyridoxine 5'-phosphate synthase |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d1bf2a3 : (GLY452) (GLY496) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Isoamylase, central domain |Pseudomonas amyloderamosa [TaxId: 32043]
d1m3ua_ : (ASN39) (PRO77) [view usage] : c.1.12.8 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Ketopantoate hydroxymethyltransferase PanB |Ketopantoate hydroxymethyltransferase PanB |Escherichia coli [TaxId: 562]
d2rh3a1 : (ILE82) (ASP129) [view usage] : a.43.1.10 |Ribbon-helix-helix |Ribbon-helix-helix |VirC2-like |VirC2 |Agrobacterium tumefaciens [TaxId: 358]
d1ekjf_ : (ILE215) (LEU285) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |beta-carbonic anhydrase |Pea (Pisum sativum) [TaxId: 3888]
d3ppqa_ : (GLN268) (HIS299) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 535025]
d2pbka_ : (GLY64) (THR108) [view usage] : b.57.1.1 |Herpes virus serine proteinase, assemblin |Herpes virus serine proteinase, assemblin |Herpes virus serine proteinase, assemblin |KSHV protease |Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]
d1wdwe_ : (ASN215) (GLY247) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Pyrococcus furiosus [TaxId: 2261]
d3vavh_ : (ASP47) (GLN84) [view usage] : c.1.12.8 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Ketopantoate hydroxymethyltransferase PanB |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1ia0a_ : (GLN372) (VAL437) [view usage] : i.10.1.1 |Microtubule complexes |Microtubule complexes |Microtubule complexes |Kif1a head-microtubule complex |interspecies complex: Mus musculus and Sus scrofa
d1qoxa_ : (LYS159) (GLU210) [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
d3vgga2 : (ASP303) (LYS340) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Glycosyltrehalose trehalohydrolase, central domain |Sulfolobus solfataricus, km1 [TaxId: 2287]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.94, d.58, b.1, c.53, d.79, c.120, i.10, e.19, a.43, b.57