Protein Concepts Dictionary

Tableau information

Concept source:  d3u3ka_  amino acid (a.a.) range (ASP40)(VAL79)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP40)   (TYR46) E1
	   (THR52)   (GLY64) H2
	   (ASP66)   (ARG72) H3
	   (PRO74)   (VAL79) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
H2      162.0°   H2                   
H3      -72.0°  124.5°   H3            
H4     -126.4°   65.0°   90.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2zptx_ :    (ILE41)   (VAL79)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4qkud2 :   (GLY138)  (MET170)   [view usage] : d.177.1.0 |FAH |FAH |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d1yz1b_ :    (GLN79)  (GLN133)   [view usage] : b.88.1.2 |Mss4-like |Mss4-like |Translationally controlled tumor protein TCTP (histamine-releasing factor) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2zyux_ :    (ILE41)   (VAL79)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2zytx_ :    (ILE41)   (VAL79)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1g3ma_ :    (LEU40)   (ILE78)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
 d2z0tb_ :    (GLY53)   (TYR98)   [view usage] : b.122.1.6 |PUA domain-like |PUA domain-like |ProFAR isomerase associated domain |automated matches |Pyrococcus horikoshii [TaxId: 53953]
 d1z28a_ :    (ASP40)   (VAL79)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4jvlb_ :    (LEU40)   (ILE78)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
 d2ox6c_ :    (ARG83)  (LEU126)   [view usage] : a.35.1.6 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |YdiL-like |Hypothetical protein SO3848 |Shewanella oneidensis [TaxId: 70863]
 d4jvmb_ :    (LEU40)   (ILE78)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |Estrogen sulfotransferase (STE, sult1e1) |Human (Homo sapiens) [TaxId: 9606]
 d2zvpx_ :    (ILE41)   (VAL79)   [view usage] : c.37.1.5 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |PAPS sulfotransferase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2ox6d_ :    (ARG83)  (LEU126)   [view usage] : a.35.1.6 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |YdiL-like |Hypothetical protein SO3848 |Shewanella oneidensis [TaxId: 70863]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37,   b.122,   d.177,    b.88,    a.35