Protein Concepts Dictionary

Tableau information

Concept source:  d2r7aa_  amino acid (a.a.) range (ARG25)(LEU62)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG25)   (GLY30) E1
	   (GLY30)   (GLY41) H2
	   (ASP50)   (PRO56) H3
	   (PRO56)   (LEU62) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
H2      130.4°   H2                   
H3       99.8°  -35.9°   H3            
H4     -109.4°  119.1° -135.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2cbia2 :   (ASP424)  (TYR468)   [view usage] : c.1.8.10 |TIM beta/alpha-barrel |(Trans)glycosidases |alpha-D-glucuronidase/Hyaluronidase catalytic domain |Hyaluronidase catalytic domain |Clostridium perfringens [TaxId: 1502]
 d2xpka2 :   (ASP424)  (GLY469)   [view usage] : c.1.8.10 |TIM beta/alpha-barrel |(Trans)glycosidases |alpha-D-glucuronidase/Hyaluronidase catalytic domain |automated matches |Clostridium perfringens [TaxId: 1502]
 d1n4aa_ :     (ARG3)   (ILE38)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Vitamin B12 binding protein BtuF |Escherichia coli [TaxId: 562]
 d2r7ab_ :    (ARG25)   (LEU62)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Shigella dysenteriae [TaxId: 622]
 d1n2za_ :    (ARG25)   (ILE60)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Vitamin B12 binding protein BtuF |Escherichia coli [TaxId: 562]
 d2r7aa_ :    (ARG25)   (LEU62)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Shigella dysenteriae [TaxId: 622]
 d2qi9f_ :    (ARG25)   (ILE60)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Vitamin B12 binding protein BtuF |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,    c.92