Protein Concepts Dictionary

Tableau information

Concept source:  d4m81a_  amino acid (a.a.) range (ARG16)(THR73)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG16)   (GLY22) E1
	   (PRO32)   (PHE38) H2
	   (ASP50)   (GLY59) H3
	   (GLU61)   (THR73) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
H2       22.5°   H2                   
H3       33.1°   52.4°   H3            
H4      156.9°  151.4°  127.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2pf0a_ :    (ARG16)   (THR73)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d2pboa_ :    (ARG16)   (THR73)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d2watb_ :  (GLY1768) (LEU1823)   [view usage] : d.150.1.0 |4'-phosphopantetheinyl transferase |4'-phosphopantetheinyl transferase |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1eqpa_ :    (ARG16)   (THR73)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Exo-beta-(1,3)-glucanase |Yeast (Candida albicans) [TaxId: 5476]
 d1h4pa_ :    (ARG54)  (PHE113)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Exo-beta-(1,3)-glucanase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4m80a_ :    (ARG16)   (THR73)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d1cz1a_ :    (ARG16)   (THR73)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Exo-beta-(1,3)-glucanase |Yeast (Candida albicans) [TaxId: 5476]
 d3o6aa_ :    (ASN12)   (THR73)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d2qeek_ :   (ARG164)  (ARG214)   [view usage] : c.1.9.8 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Uronate isomerase-like |Uncharacterized protein BH0493 |Bacillus halodurans [TaxId: 86665]
 d4m81a_ :    (ARG16)   (THR73)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d1vsaq1 :     (ALA3)   (ASP63)   [view usage] : d.55.1.1 |Ribosomal protein L22 |Ribosomal protein L22 |Ribosomal protein L22 |Ribosomal protein L22 |Thermus thermophilus [TaxId: 274]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,   d.150,    d.55