Protein Concepts Dictionary

Tableau information

Concept source:  d3g4aa_  amino acid (a.a.) range (LEU154)(LYS207)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: EHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU154)  (ASN163) E1
	  (ASN163)  (LEU173) H2
	  (GLN180)  (LYS197) H3
	  (CYS198)  (LYS207) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                          
H2     -131.3°   H2                   
H3      -37.8° -142.9°   H3            
H4       97.8°  -39.6° -129.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1o27a_ :   (LEU154)  (LYS207)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]
 d3jzqb_ :    (ASN25)   (LEU85)   [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3fdoa_ :    (ASN25)   (LEU85)   [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ahxc_ :   (ASN222)  (ASN271)   [view usage] : c.1.8.4 |TIM beta/alpha-barrel |(Trans)glycosidases |Family 1 of glycosyl hydrolase |Beta-glucosidase A |Clostridium cellulovorans [TaxId: 1493]
 d3n0ba_ :   (LEU154)  (ALA209)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]
 d3jzoa_ :    (ASN25)   (LEU85)   [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ai9a_ :   (THR289)  (GLY335)   [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
 d1o24c_ :   (LEU154)  (LYS207)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]
 d3daba_ :    (GLN26)   (LEU85)   [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4katb_ :   (LEU154)  (LYS207)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]
 d1o26c_ :   (LEU154)  (LYS207)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]
 d1u20a1 :   (LEU154)  (ARG209)   [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |U8 snorna-binding protein x29 |African clawed frog (Xenopus laevis) [TaxId: 8355]
 d2gp5a_ :   (THR289)  (GLY335)   [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
 d2gp5b_ :   (THR289)  (GLY335)   [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,    b.82,   d.207,   d.113,    a.42