Tableau information
Concept source: d2h72b_ amino acid (a.a.) range (GLY21)(ASN59)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY21) (PHE27) E1
(CYS32) (GLU48) H2
(TYR49) (THR54) H3
(THR54) (ASN59) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -161.0° H2
H3 -69.9° -126.1° H3
E4 -23.7° -162.0° 47.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1d6aa_ : (VAL1) (GLY56) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Pokeweed antiviral protein alpha |Pokeweed (Phytolacca americana) [TaxId: 3527]
d1syxa_ : (ARG24) (ASP62) [view usage] : c.47.1.8 |Thioredoxin fold |Thioredoxin-like |spliceosomal protein U5-15Kd |spliceosomal protein U5-15Kd |Human (Homo sapiens) [TaxId: 9606]
d1jzta_ : (ALA193) (ARG220) [view usage] : c.104.1.1 |YjeF N-terminal domain-like |YjeF N-terminal domain-like |YjeF N-terminal domain-like |Hypothetical protein YNL200c (YNU0_YEAST) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1vgld_ : (TYR8) (ASP46) [view usage] : c.47.1.15 |Thioredoxin fold |Thioredoxin-like |KaiB-like |automated matches |Thermosynechococcus elongatus [TaxId: 197221]
d3u7ra_ : (VAL2) (HIS39) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Paracoccus denitrificans [TaxId: 318586]
d1ogia2 : (GLY185) (SER223) [view usage] : c.25.1.1 |Ferredoxin reductase-like, C-terminal NADP-linked domain |Ferredoxin reductase-like, C-terminal NADP-linked domain |Reductases |Ferredoxin reductase (flavodoxin reductase) |Anabaena sp., pcc 7119 [TaxId: 1167]
d4nf0a_ : (VAL30) (ASN69) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d4kd5a_ : (LYS148) (LYS185) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d2av4a1 : (LEU43) (ASP80) [view usage] : c.47.1.8 |Thioredoxin fold |Thioredoxin-like |spliceosomal protein U5-15Kd |automated matches |Plasmodium yoelii [TaxId: 5861]
d2or2a_ : (ASN191) (GLY238) [view usage] : c.1.18.2 |TIM beta/alpha-barrel |PLC-like phosphodiesterases |Bacterial PLC |automated matches |Bacillus thuringiensis [TaxId: 1428]
d4c0rb_ : (LYS3) (LYS48) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d4c0ra_ : (LYS3) (LYS48) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus mutans [TaxId: 1309]
d3esab_ : (THR113) (GLY148) [view usage] : c.69.1.30 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Cutinase-like |automated matches |Fusarium solani [TaxId: 70791]
d1puua_ : (GLU2) (ASN60) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
d1a88a_ : (ALA90) (SER121) [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |Chloroperoxidase L |Streptomyces lividans [TaxId: 1916]
d3sdwa_ : (ARG10) (GLY43) [view usage] : c.121.1.0 |Ribose/Galactose isomerase RpiB/AlsB |Ribose/Galactose isomerase RpiB/AlsB |automated matches |automated matches |Coccidioides immitis [TaxId: 246410]
d4kd5b_ : (LYS148) (LYS185) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3ul3a_ : (VAL72) (ASP109) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d2qeta_ : (VAL1) (ASP56) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Phytolacca dioica [TaxId: 29725]
d1k66a_ : (ALA64) (THR100) [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Response regulator for cyanobacterial phytochrome |Calothrix sp. pcc 7601, RcpB [TaxId: 1188]
d4eb2a_ : (LEU4) (ASN60) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |European mistletoe (Viscum album) [TaxId: 3972]
d1jkmb_ : (VAL196) (ILE231) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Carboxylesterase |Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
d3o90b_ : (TYR47) (ARG104) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
d2ahua2 : (SER64) (CYS93) [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Putative enzyme YdiF N-terminal domain |Escherichia coli [TaxId: 562]
d4kd5d_ : (LYS148) (LYS185) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d4j7aa_ : (THR194) (CYS230) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Uncultured bacterium [TaxId: 77133]
d2f23a1 : (ARG3) (GLU76) [view usage] : a.2.1.1 |Long alpha-hairpin |GreA transcript cleavage protein, N-terminal domain |GreA transcript cleavage protein, N-terminal domain |GreA transcript cleavage protein, N-terminal domain |Thermus thermophilus [TaxId: 274]
d1wwjb_ : (THR1007) (ASP1046) [view usage] : c.47.1.15 |Thioredoxin fold |Thioredoxin-like |KaiB-like |automated matches |Synechocystis sp. [TaxId: 1143]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.94, c.124, d.165, c.23, c.47, c.104, c.25, c.121, c.33, a.2