Tableau information
Concept source: d1oywa2 amino acid (a.a.) range (VAL141)(ALA182)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL141) (GLU147) E1
(GLU147) (SER152) H2
(PRO160) (PRO173) H3
(PRO176) (ALA182) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 73.5° H2
H3 -160.0° -99.5° H3
E4 -21.3° -94.7° -154.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3orfa_ : (GLY118) (VAL171) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d4n09a_ : (ARG162) (LEU196) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
d4je1b_ : (ARG46) (VAL81) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d1g9xa_ : (LYS173) (HIS211) [view usage] : c.37.1.12 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ABC transporter ATPase domain-like |MJ1267 |Methanococcus jannaschii [TaxId: 2190]
d1tuxa_ : (GLY41) (THR84) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d1wp9a1 : (SER127) (THR163) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |putative ATP-dependent RNA helicase PF2015 |Pyrococcus furiosus [TaxId: 2261]
d1ps9a2 : (GLN556) (GLY593) [view usage] : c.3.1.1 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |C-terminal domain of adrenodoxin reductase-like |2,4-dienoyl-CoA reductase, C-terminal domain |Escherichia coli [TaxId: 562]
d1cw0a_ : (ARG58) (TRP115) [view usage] : c.52.1.15 |Restriction endonuclease-like |Restriction endonuclease-like |Very short patch repair (VSR) endonuclease |Very short patch repair (VSR) endonuclease |Escherichia coli [TaxId: 562]
d2hnaa_ : (VAL83) (GLY118) [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Escherichia coli [TaxId: 562]
d1qxna_ : (PRO84) (SER113) [view usage] : c.46.1.3 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Single-domain sulfurtransferase |Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) |Wolinella succinogenes [TaxId: 844]
d1odga_ : (ARG58) (TRP115) [view usage] : c.52.1.15 |Restriction endonuclease-like |Restriction endonuclease-like |Very short patch repair (VSR) endonuclease |Very short patch repair (VSR) endonuclease |Escherichia coli [TaxId: 562]
d4unwa_ : (ARG57) (ARG90) [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/eq/newmarket/93/(h3n8)) [TaxId: 159470]
d1eiwa_ : (ASP40) (ARG74) [view usage] : c.23.3.1 |Flavodoxin-like |Hypothetical protein MTH538 |Hypothetical protein MTH538 |Hypothetical protein MTH538 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d3thaa_ : (ALA12) (VAL46) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d4r9oa_ : (THR47) (GLY85) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Salmonella enterica [TaxId: 99287]
d2b4qa_ : (ALA141) (ARG194) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2xpea_ : (ARG47) (CYS82) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Yersinia pseudotuberculosis [TaxId: 502800]
d1xpja_ : (MET1) (ALA48) [view usage] : c.108.1.18 |HAD-like |HAD-like |Hypothetical protein VC0232 |Hypothetical protein VC0232 |Vibrio cholerae [TaxId: 666]
d1hfbf_ : (SER173) (ASN202) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Baker's yeast (Saccharomyces cerevisiae), tyrosine-regulated isozyme [TaxId: 4932]
d1veca_ : (GLN230) (SER266) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEAD box RNA helicase rck/p54 |Human (Homo sapiens) [TaxId: 9606]
d1hfbg_ : (SER173) (ASN202) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Baker's yeast (Saccharomyces cerevisiae), tyrosine-regulated isozyme [TaxId: 4932]
d1w8ia_ : (MSE1) (THR42) [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein AF1683 |Archaeoglobus fulgidus [TaxId: 2234]
d2fr0a1 : (THR1793) (ALA1838) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Erythromycin synthase, eryAI, 1st ketoreductase module |Saccharopolyspora erythraea [TaxId: 1836]
d3fhcb_ : (LYS237) (ALA275) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ynha_ : (SER316) (ASP352) [view usage] : d.126.1.7 |Pentein, beta/alpha-propeller |Pentein |Succinylarginine dihydrolase-like |automated matches |Escherichia coli [TaxId: 562]
d1s3aa1 : (ILE19) (ARG56) [view usage] : c.47.1.22 |Thioredoxin fold |Thioredoxin-like |Mitochondrial ribosomal protein L51/S25/CI-B8 domain |NADH-ubiquinone oxidoreductase b8 subunit, CI-B8 |Human (Homo sapiens) [TaxId: 9606]
d3fmob_ : (LYS237) (ALA275) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qgma_ : (LYS6) (ASN45) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d4n09d_ : (ARG162) (LEU196) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
d2bufg_ : (LYS28) (GLY69) [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d3zrda_ : (ARG47) (CYS82) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Yersinia pseudotuberculosis [TaxId: 502800]
d3kjra1 : (ASN61) (SER89) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Babesia bovis [TaxId: 484906]
d1jkmb_ : (PRO299) (VAL332) [view usage] : c.69.1.2 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase |Carboxylesterase |Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
d1u6za1 : (HIS466) (PRO509) [view usage] : a.211.1.5 |HD-domain/PDEase-like |HD-domain/PDEase-like |Ppx associated domain |Exopolyphosphatase Ppx C-terminal domain |Escherichia coli [TaxId: 562]
d1rqda_ : (THR98) (THR131) [view usage] : c.31.1.1 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Deoxyhypusine synthase, DHS |Deoxyhypusine synthase, DHS |Human (Homo sapiens) [TaxId: 9606]
d2bz0b_ : (LEU47) (ARG90) [view usage] : c.144.1.1 |RibA-like |RibA-like |RibA-like |GTP cyclohydrolase II, RibA |Escherichia coli [TaxId: 562]
d2jlqa1 : (ASN279) (THR315) [view usage] : c.37.1.14 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RNA helicase |automated matches |Dengue virus 4 [TaxId: 408688]
d1qxha_ : (ARG47) (ILE83) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thiol peroxidase Tpx |Escherichia coli [TaxId: 562]
d4n08a_ : (ARG162) (LEU196) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
d1x52a1 : (ASP56) (SER94) [view usage] : d.79.3.2 |Bacillus chorismate mutase-like |L30e-like |ERF1/Dom34 C-terminal domain-like |Cell division protein pelota |Human (Homo sapiens) [TaxId: 9606]
d1roza_ : (THR98) (THR130) [view usage] : c.31.1.1 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Deoxyhypusine synthase, DHS |Deoxyhypusine synthase, DHS |Human (Homo sapiens) [TaxId: 9606]
d1xpjb_ : (MET1) (ALA48) [view usage] : c.108.1.18 |HAD-like |HAD-like |Hypothetical protein VC0232 |Hypothetical protein VC0232 |Vibrio cholerae [TaxId: 666]
d2jpda_ : (SER100) (PHE123) [view usage] : c.52.1.20 |Restriction endonuclease-like |Restriction endonuclease-like |XPF/Rad1/Mus81 nuclease |DNA excision repair protein ERCC-1 |Human (Homo sapiens) [TaxId: 9606]
d1nf2a_ : (ARG3) (GLY42) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Hypothetical protein TM0651 |Thermotoga maritima [TaxId: 2336]
d4jdpa_ : (LYS6) (ASN45) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.19, c.69, c.2, c.108, a.211, c.72, c.23, c.37, c.47, c.31, c.71, d.126, c.73, d.79, c.120, c.52, c.3, c.46, c.144