Tableau information
Concept source: d1lqlj_ amino acid (a.a.) range (ARG1891)(HIS1941)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG1891) (TRP1897) E1
(GLU1905) (ARG1918) H2
(CYS1919) (GLN1926) H3
(GLN1930) (HIS1941) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 136.7° H2
H3 -150.0° -70.3° H3
E4 -13.2° 145.4° -144.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2ixdb_ : (HIS5) (ASP38) [view usage] : c.134.1.0 |LmbE-like |LmbE-like |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
d2vd7a_ : (ILE14) (VAL48) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d4im4a_ : (ARG262) (LYS322) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d3fr6a1 : (ASN4) (GLY36) [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1vi5b_ : (GLU116) (LEU143) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d1vi5a_ : (GLU116) (LEU143) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d2j00b1 : (ASP160) (LEU187) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Thermus thermophilus [TaxId: 274]
d2xmla_ : (ILE16) (ILE50) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1otga_ : (ASP58) (LEU110) [view usage] : d.80.1.2 |Tautomerase/MIF |Tautomerase/MIF |5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) |5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) |Escherichia coli [TaxId: 562]
d1vi5c_ : (GLU116) (LEU143) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Archaeoglobus fulgidus [TaxId: 2234]
d1r46a2 : (ASN224) (PRO265) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d2radb_ : (THR108) (ASP172) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d2gmha2 : (PRO284) (GLU335) [view usage] : d.16.1.8 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |Electron transfer flavoprotein-ubiquinone oxidoreductase-like |Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO |Pig (Sus scrofa) [TaxId: 9823]
d2xzmb_ : (ARG116) (LEU143) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d4jcuc_ : (SER59) (SER112) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Deinococcus radiodurans [TaxId: 243230]
d1nyec_ : (THR516) (SER563) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Osmotically inducible protein OsmC |Escherichia coli [TaxId: 562]
d1b64a_ : (GLY49) (ALA87) [view usage] : d.58.12.1 |Ferredoxin-like |eEF-1beta-like |eEF-1beta-like |Guanine nucleotide exchange factor (GEF) domain from elongation factor-1 beta |Human (Homo sapiens) [TaxId: 9606]
d2c8ua2 : (ASP4) (SER37) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma haematobium) [TaxId: 6185]
d1okta2 : (ASN4) (GLY36) [view usage] : c.47.1.5 |Thioredoxin fold |Thioredoxin-like |Glutathione S-transferase (GST), N-terminal domain |Pf GST |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d3znj2_ : (SER54) (HIS86) [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d2caia2 : (ASP4) (SER37) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma haematobium) [TaxId: 6185]
d1zbma1 : (LYS2) (GLU36) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Hypothetical protein AF1704 |Archaeoglobus fulgidus [TaxId: 2234]
d2l5oa_ : (VAL27) (PRO67) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Neisseria meningitidis [TaxId: 491]
d1nyee_ : (GLY912) (SER963) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Osmotically inducible protein OsmC |Escherichia coli [TaxId: 562]
d4jcub_ : (SER59) (SER112) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Deinococcus radiodurans [TaxId: 243230]
d2rada1 : (THR108) (ASP172) [view usage] : c.150.1.3 |EreA/ChaN-like |EreA/ChaN-like |EreA-like |Succinoglycan biosynthesis protein BC3120 |Bacillus cereus [TaxId: 1396]
d2ixda_ : (HIS5) (ASP38) [view usage] : c.134.1.0 |LmbE-like |LmbE-like |automated matches |automated matches |Bacillus cereus [TaxId: 1396]
d1kbla2 : (GLU443) (SER469) [view usage] : c.8.1.1 |The "swivelling" beta/beta/alpha domain |Phosphohistidine domain |Pyruvate phosphate dikinase, central domain |Pyruvate phosphate dikinase, central domain |Clostridium symbiosum [TaxId: 1512]
d1lqla_ : (ARG91) (HIS141) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Hypothetical protein MPN625 |Mycoplasma pneumoniae [TaxId: 2104]
d1qwia_ : (THR96) (SER143) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Osmotically inducible protein OsmC |Escherichia coli [TaxId: 562]
d2nsja_ : (ARG9) (VAL41) [view usage] : c.23.8.1 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |Escherichia coli [TaxId: 562]
d3j38a_ : (ARG120) (THR148) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Drosophila melanogaster [TaxId: 7227]
d1nyea_ : (THR116) (SER163) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Osmotically inducible protein OsmC |Escherichia coli [TaxId: 562]
d1uspa_ : (ALA91) (GLU139) [view usage] : d.227.1.1 |OsmC-like |OsmC-like |Ohr/OsmC resistance proteins |Organic hydroperoxide resistance protein Ohr |Deinococcus radiodurans [TaxId: 1299]
d4jcua_ : (ASP60) (SER112) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Deinococcus radiodurans [TaxId: 243230]
d3bbnb1 : (ASP163) (LEU190) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, chloroplast (70S ribosome functional complex) |Spinach (Spinacia oleracea) [TaxId: 3562]
d3rhma_ : (ARG644) (GLY675) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1xtoa_ : (HIS106) (GLU141) [view usage] : d.157.1.6 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Coenzyme PQQ synthesis protein B, PqqB |Coenzyme PQQ synthesis protein B, PqqB |Pseudomonas putida [TaxId: 303]
d4ewla_ : (PRO5) (CYS40) [view usage] : c.134.1.1 |LmbE-like |LmbE-like |LmbE-like |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, c.94, d.58, i.1, c.82, d.157, c.23, c.47, c.8, d.16, d.227, d.80, c.134, c.150