Tableau information
Concept source: d1b9ba_ amino acid (a.a.) range (VAL163)(TYR211)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL163) (PRO169) E1
(THR180) (TYR199) H2
(GLU201) (ILE207) H3
(ILE207) (TYR211) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 144.6° H2
H3 -66.0° 138.5° H3
E4 -23.6° 160.1° -42.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3dh1a_ : (VAL55) (THR103) [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4jrha2 : (GLY299) (SER335) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
d3ej7c_ : (PRO1) (GLY45) [view usage] : d.80.1.1 |Tautomerase/MIF |Tautomerase/MIF |4-oxalocrotonate tautomerase-like |automated matches |Pseudomonas pavonaceae [TaxId: 47881]
d1zbra1 : (GLU49) (GLU77) [view usage] : d.126.1.6 |Pentein, beta/alpha-propeller |Pentein |Porphyromonas-type peptidylarginine deiminase |Putative peptidyl-arginine deiminase |Porphyromonas gingivalis [TaxId: 837]
d4ff7a_ : (VAL161) (GLY210) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3dh1d_ : (VAL55) (THR103) [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ivoa1 : (ALA123) (ASN158) [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |EGF receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
d2obva2 : (HIS201) (GLN245) [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1c4za_ : (LEU500) (PHE536) [view usage] : d.148.1.1 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |Ubiquitin-protein ligase E3a (E6ap) |Human (Homo sapiens) [TaxId: 9606]
d4pmja_ : (LEU50) (LEU84) [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Rhizobium meliloti [TaxId: 266834]
d1sq0a_ : (ASP514) (GLU557) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A1 domain, vWA1 |Human (Homo sapiens) [TaxId: 9606]
d4bqfb_ : (LYS334) (THR380) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3ej7g_ : (PRO1) (GLY45) [view usage] : d.80.1.1 |Tautomerase/MIF |Tautomerase/MIF |4-oxalocrotonate tautomerase-like |automated matches |Pseudomonas pavonaceae [TaxId: 47881]
d1un9a4 : (ASN131) (ALA192) [view usage] : c.119.1.2 |DAK1/DegV-like |DAK1/DegV-like |DAK1 |Dihydroxyacetone kinase |Citrobacter freundii [TaxId: 546]
d3ej7a_ : (PRO1) (GLY45) [view usage] : d.80.1.1 |Tautomerase/MIF |Tautomerase/MIF |4-oxalocrotonate tautomerase-like |automated matches |Pseudomonas pavonaceae [TaxId: 47881]
d1o6ua3 : (LYS187) (ALA222) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Supernatant protein factor (SPF), middle domain |Human (Homo sapiens) [TaxId: 9606]
d4jcuc_ : (HIS3) (ARG46) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Deinococcus radiodurans [TaxId: 243230]
d2h8ea_ : (MET53) (LYS101) [view usage] : d.79.6.1 |Bacillus chorismate mutase-like |Holliday junction resolvase RusA |Holliday junction resolvase RusA |automated matches |Escherichia coli [TaxId: 562]
d4ls5b2 : (ASP297) (LYS334) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d1zvda_ : (ALA390) (ARG427) [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h4zb_ : (ASP53) (TRP85) [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ekjc_ : (PRO154) (VAL184) [view usage] : c.53.2.1 |Resolvase-like |beta-carbonic anhydrase, cab |beta-carbonic anhydrase, cab |beta-carbonic anhydrase |Pea (Pisum sativum) [TaxId: 3888]
d1olma3 : (LYS187) (ALA222) [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Supernatant protein factor (SPF), middle domain |Human (Homo sapiens) [TaxId: 9606]
d2etna1 : (ARG3) (GLU76) [view usage] : a.2.1.1 |Long alpha-hairpin |GreA transcript cleavage protein, N-terminal domain |GreA transcript cleavage protein, N-terminal domain |GreA transcript cleavage protein, N-terminal domain |Thermus aquaticus [TaxId: 271]
d1z24a1 : (LYS126) (SER171) [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Insecticyanin |Tobacco hornworm (Manduca sexta) [TaxId: 7130]
d1e4oa_ : (TYR300) (ASN344) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d4jcub_ : (PRO2) (ARG46) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Deinococcus radiodurans [TaxId: 243230]
d2amva_ : (LYS332) (ASN376) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3ej7e_ : (PRO1) (GLY45) [view usage] : d.80.1.1 |Tautomerase/MIF |Tautomerase/MIF |4-oxalocrotonate tautomerase-like |automated matches |Pseudomonas pavonaceae [TaxId: 47881]
d1ivob1 : (ALA123) (GLN157) [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |EGF receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
d1d02a_ : (PHE148) (PRO182) [view usage] : c.52.1.8 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease MunI |Restriction endonuclease MunI |Mycoplasma, unidentified species [TaxId: 2093]
d2cpya1 : (VAL544) (ASN580) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 12 |Human (Homo sapiens) [TaxId: 9606]
d4ls5a2 : (ASP297) (SER332) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d1pwha_ : (GLY161) (THR195) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |L-serine dehydratase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2ecpa_ : (GLU333) (ASN376) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d1d02b_ : (PHE148) (PRO182) [view usage] : c.52.1.8 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease MunI |Restriction endonuclease MunI |Mycoplasma, unidentified species [TaxId: 2093]
d4jcua_ : (HIS3) (ARG46) [view usage] : d.80.1.0 |Tautomerase/MIF |Tautomerase/MIF |automated matches |automated matches |Deinococcus radiodurans [TaxId: 243230]
d1evya2 : (PRO119) (PRO154) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Glycerol-3- phosphate dehydrogenase |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1tqya2 : (ASP304) (LYS341) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA |Streptomyces coelicolor [TaxId: 1902]
d4htga1 : (ILE12) (ILE51) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1s0yc_ : (PRO2) (GLY46) [view usage] : d.80.1.1 |Tautomerase/MIF |Tautomerase/MIF |4-oxalocrotonate tautomerase-like |Trans-3-chloroacrylic acid dehalogenase alpha-subunit, CaaD1 |Pseudomonas pavonaceae [TaxId: 47881]
d4im7a1 : (GLY174) (ARG225) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 199310]
d1c7qa_ : (SER133) (THR174) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Bacillus stearothermophilus [TaxId: 1422]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.94, c.2, d.58, c.79, c.80, c.95, b.60, c.87, c.60, c.62, c.13, d.126, c.97, c.53, d.79, c.52, d.148, d.130,
c.119, d.80, a.2